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Subject: Chemistry Subject: Medicine, Health and Life Sciences Publication Year: 2021

1 to 10 of 10 Results

SFB-TRR 161 D04 "Quantitative Aspects of Immersive Analytics for the Life Sciences"(Universität Konstanz) Dec 6, 2021SFB/Transregio 161 "Quantitative Methods for Visual Computing"
NGS data related to Bröhm et al.: Methylation of recombinant mononucleosomes by DNMT3A demonstrates efficient linker DNA methylation and a role of H3K36me3 Nov 25, 2021 - Amplicon based bisulfite NGS data Jeltsch, Albert; Bashtrykov, Pavel; Bröhm, Alexander; Dukatz, Michael; Adam, Sabrina, 2021, "NGS data related to Bröhm et al.: Methylation of recombinant mononucleosomes by DNMT3A demonstrates efficient linker DNA methylation and a role of H3K36me3", https://doi.org/10.18419/darus-1252, DaRUS, V2 Methylation experiments: For the competitive nucleosome methylation experiments, 0.6 pmol of each nucleosome variant were digested with MluI (NEB) for 60 min at 37°C in 10 µL NEB Cutsmart buffer (50 mM KOAc/20 mM Tris-acetate pH 7.9, 10 mM Magnesium Acetate, 100 µg/mL BSA) to rem...
Data related to "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects" Nov 11, 2021 - Amplicon based bisulfite NGS data Jeltsch, Albert; Bashtrykov, Pavel; Adam, Sabrina; Mack, Alexandra; Emperle, Max, 2021, "Data related to "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects"", https://doi.org/10.18419/darus-2231, DaRUS, V1 Methylation of substrate libraries Single-stranded DNA oligonucleotides used for generation of double stranded substrates with a distance of 12 base pairs between CpG sites were obtained from IDT. Second strand synthesis was conducted by a primer extension reaction using one univ...
Biophysics Group(Universität Stuttgart) Sep 24, 2021Institute of Biomaterials and Biomolecular Systems
EnzymeML(Universität Stuttgart) Sep 16, 2021Institute of Biochemistry and Technical Biochemistry The EnzymeML data repository of the Institute of Biochemistry and Technical Biochemistry.
Measuring the viscoelastic properties and curing characterstics of Vertecem V+ bone cement using oscillatory rheometer Jun 23, 2021 - Rheological characterisation Trivedi, Zubin, 2021, "Measuring the viscoelastic properties and curing characterstics of Vertecem V+ bone cement using oscillatory rheometer", https://doi.org/10.18419/darus-2032, DaRUS, V1, UNF:6:/4Hsn/UYH9QPsLRp8mLktg== [fileUNF] A commercially available bone cement (Vertecem V+) is subjected to an oscillometric test using a parallel plate rheomter in order to characterise its viscoelastic properties. For this, a small amount of bone cement is placed between the plates of the rheometer and subjected to os...
Rheological characterisation(Universität Stuttgart) Jun 21, 2021Experiment data
Experiment data(Universität Stuttgart) Jun 21, 2021C03: Modelling of material injection processes into porous structures applied to vertebroplasty
C03: Modelling of material injection processes into porous structures applied to vertebroplasty(Universität Stuttgart) Jun 21, 2021SFB 1313 "Interface-Driven Multi-Field Processes in Porous Media" The effectiveness of bone-cement injection during vertebroplasty is highly dependent on the cement-injection-distribution pattern, the interface effects between the porous bone structure and the initially liquid cement, as well as the curing process of the bone cement itself. Tak...
Data related to "Structural and biochemical insight into the mechanism of dual CpG site binding and methylation by DNMT3A" Apr 12, 2021 - Amplicon based bisulfite NGS data Jeltsch, Albert; Bashtrykov, Pavel; Adam, Sabrina; Kunert, Stefan, 2021, "Data related to "Structural and biochemical insight into the mechanism of dual CpG site binding and methylation by DNMT3A"", https://doi.org/10.18419/darus-1781, DaRUS, V1 Methylation of substrate libraries Single-stranded DNA oligonucleotides used for generation of double stranded substrates with different distance between CpG sites were obtained from IDT. Sixteen single-stranded oligonucleotides were pooled in equimolar amounts and the second str...

SFB-TRR 161 D04 "Quantitative Aspects of Immersive Analytics for the Life Sciences"(Universität Konstanz)

Dec 6, 2021SFB/Transregio 161 "Quantitative Methods for Visual Computing"

NGS data related to Bröhm et al.: Methylation of recombinant mononucleosomes by DNMT3A demonstrates efficient linker DNA methylation and a role of H3K36me3

Nov 25, 2021 - Amplicon based bisulfite NGS data

Jeltsch, Albert; Bashtrykov, Pavel; Bröhm, Alexander; Dukatz, Michael; Adam, Sabrina, 2021, "NGS data related to Bröhm et al.: Methylation of recombinant mononucleosomes by DNMT3A demonstrates efficient linker DNA methylation and a role of H3K36me3", https://doi.org/10.18419/darus-1252, DaRUS, V2

Methylation experiments: For the competitive nucleosome methylation experiments, 0.6 pmol of each nucleosome variant were digested with MluI (NEB) for 60 min at 37°C in 10 µL NEB Cutsmart buffer (50 mM KOAc/20 mM Tris-acetate pH 7.9, 10 mM Magnesium Acetate, 100 µg/mL BSA) to rem...

Data related to "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects"

Nov 11, 2021 - Amplicon based bisulfite NGS data

Jeltsch, Albert; Bashtrykov, Pavel; Adam, Sabrina; Mack, Alexandra; Emperle, Max, 2021, "Data related to "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects"", https://doi.org/10.18419/darus-2231, DaRUS, V1

Methylation of substrate libraries Single-stranded DNA oligonucleotides used for generation of double stranded substrates with a distance of 12 base pairs between CpG sites were obtained from IDT. Second strand synthesis was conducted by a primer extension reaction using one univ...

Biophysics Group(Universität Stuttgart)

Sep 24, 2021Institute of Biomaterials and Biomolecular Systems

EnzymeML(Universität Stuttgart)

Sep 16, 2021Institute of Biochemistry and Technical Biochemistry

The EnzymeML data repository of the Institute of Biochemistry and Technical Biochemistry.

Measuring the viscoelastic properties and curing characterstics of Vertecem V+ bone cement using oscillatory rheometer

Jun 23, 2021 - Rheological characterisation

Trivedi, Zubin, 2021, "Measuring the viscoelastic properties and curing characterstics of Vertecem V+ bone cement using oscillatory rheometer", https://doi.org/10.18419/darus-2032, DaRUS, V1, UNF:6:/4Hsn/UYH9QPsLRp8mLktg== [fileUNF]

A commercially available bone cement (Vertecem V+) is subjected to an oscillometric test using a parallel plate rheomter in order to characterise its viscoelastic properties. For this, a small amount of bone cement is placed between the plates of the rheometer and subjected to os...

Rheological characterisation(Universität Stuttgart)

Jun 21, 2021Experiment data

Experiment data(Universität Stuttgart)

Jun 21, 2021C03: Modelling of material injection processes into porous structures applied to vertebroplasty

C03: Modelling of material injection processes into porous structures applied to vertebroplasty(Universität Stuttgart)

Jun 21, 2021SFB 1313 "Interface-Driven Multi-Field Processes in Porous Media"

The effectiveness of bone-cement injection during vertebroplasty is highly dependent on the cement-injection-distribution pattern, the interface effects between the porous bone structure and the initially liquid cement, as well as the curing process of the bone cement itself. Tak...

Data related to "Structural and biochemical insight into the mechanism of dual CpG site binding and methylation by DNMT3A"

Apr 12, 2021 - Amplicon based bisulfite NGS data

Jeltsch, Albert; Bashtrykov, Pavel; Adam, Sabrina; Kunert, Stefan, 2021, "Data related to "Structural and biochemical insight into the mechanism of dual CpG site binding and methylation by DNMT3A"", https://doi.org/10.18419/darus-1781, DaRUS, V1

Methylation of substrate libraries Single-stranded DNA oligonucleotides used for generation of double stranded substrates with different distance between CpG sites were obtained from IDT. Sixteen single-stranded oligonucleotides were pooled in equimolar amounts and the second str...

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