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126,421 to 126,430 of 127,081 Results
SorptionCoefficientsAndPKAFitted.tar
Jun 16, 2020 - EICP Model Calibration
TAR Archive - 796.2 KB - MD5: 3b9a710a47f130f00f948548ff2e7805
Simulation
SorptionCoefficientsOnlyFitted.tar
Jun 16, 2020 - EICP Model Calibration
TAR Archive - 794.3 KB - MD5: 90eda7814a3a2e0f4386ac36686a904f
Simulation
Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Jun 1, 2020 - Glycoside Hydrolase 19 Engineering Database
Orlando, Marco, 2020, "Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database", https://doi.org/10.18419/DARUS-803, DaRUS, V1
A starting alignment was built if other sequences with a known PDB structure were available, by performing a GH19 domain structure-based alignment generated through the mmaker command implemented in ChimeraX. Other seed sequences in the same superfamily were added to this fixed structural alignment by the use of “--add” flag option available in MAF...
CHITs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 110.9 KB - MD5: 9c4c77ebc1b7f7a3c4c4f9bf713aa7fe
Profile hidden Markov model in HMMER format for the chitinase superfamily
ELYSs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 81.4 KB - MD5: 61d6a4adfde821f447d18458a00e7667
Profile hidden Markov model in HMMER format for the endolysin superfamily
Reference_alignment_CHITs.aln
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 15.9 KB - MD5: 1de23a931f1988e2e26fa21ca210605c
Clustal alignment for the profile hidden Markov model of the chitinase superfamily
Reference_alignment_CHITs.stockholm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 18.2 KB - MD5: 116056d1f562c17e3a2b0ebe8714d0fe
Stockholm alignment for the profile hidden Markov model of the chitinase superfamily
Reference_alignment_ELYSs.aln
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 394.5 KB - MD5: b30ebdc0bf4ad0af8b50c15f6339b5e7
Clustal alignment for the profile hidden Markov model of the endolysin superfamily
Reference_alignment_ELYSs.stockholm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 419.3 KB - MD5: 88e1f79860f29df5626599bd48cfcff3
Stockholm alignment for the profile hidden Markov model of the endolysin superfamily
Seed sequences for the Glycoside Hydrolase 19 Engineering Database
Jun 1, 2020 - Glycoside Hydrolase 19 Engineering Database
Orlando, Marco, 2020, "Seed sequences for the Glycoside Hydrolase 19 Engineering Database", https://doi.org/10.18419/DARUS-804, DaRUS, V1
Query sequences for the individual BLAST searches used to initialize the Glycoside Hydrolase 19 Engineering Database (GH19ED, https://gh19ed.biocatnet.de/).
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