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This is the Data Repository of the University of Stuttgart.

SFB 1313 "Interface-Driven Multi-Field Processes in Porous Media"

SFB 1333 "Molecular heterogeneous catalysis in confined geometries"

Institute of Biochemistry

Institute of Applied Mechanics (MIB)

Institute of Thermodynamics and Thermal Process Engineering

Stuttgart Center for Simulation Science (SC SimTech)

Cluster of Excellence Integrative Computational Design and Construction for Architecture (EXC IntCDC)

SFB/Transregio 161 "Quantitative Methods for Visual Computing"

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123,861 to 123,870 of 124,406 Results

Seed_sequences.fasta Jun 1, 2020 - Seed sequences for the Glycoside Hydrolase 19 Engineering Database Unknown - 20.3 KB - MD5: 1961bf93199d823fa0fb953e5e120100 FASTA headers comprise (from left to right): number of the seed sequence; sequence identifier (sid) in the GH19ED database; protein identifier (pid) in the GH19ED database; Uniprot or NCBI accession.
CHITs_60_percent_identity_cutoff.graphml Jun 1, 2020 - GraphML files for protein sequence networks of glycoside hydrolase 19 homologues GraphML Network Data - 14.3 MB - MD5: a314980fa659092d23cfda60fb45929a Protein sequence network for the chitinase domains from the Glycoside Hydrolase 19 Engineering Database. The GraphML file contains representative nodes (clustered by 90% in USEARCH) connected by at least 60% pairwise sequence identity (edge weights derived from Needleman-Wunsch alignments).
ELYSs_60_percent_identity_cutoff.graphml Jun 1, 2020 - GraphML files for protein sequence networks of glycoside hydrolase 19 homologues GraphML Network Data - 5.6 MB - MD5: f255b9e12d219a65533643ae3b529282 Protein sequence network for the endolysin domains from the Glycoside Hydrolase 19 Engineering Database. The GraphML file contains representative nodes (clustered by 90% in USEARCH) connected by at least 60% pairwise sequence identity (edge weights derived from Needleman-Wunsch alignments).
GH19_40_percent_identity_cutoff.graphml Jun 1, 2020 - GraphML files for protein sequence networks of glycoside hydrolase 19 homologues GraphML Network Data - 72.1 MB - MD5: 1ef54be08ab8b4dbe1f5b4a0407fac75 Protein sequence network for representative GH19 domains (corresponding to Pfam’s GH19 profile HMM: PF00182) from the Glycoside Hydrolase 19 Engineering Database. The GraphML file contains representative nodes (clustered by 90% in USEARCH) connected by at least 40% pairwise sequence identity (edge weights derived from Needleman-Wunsch alignments).
bat.png May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms PNG Image - 668.2 KB - MD5: a3e7399fe3a20c80bfba9e0c4483cc06 DocumentationExample Sample rendering of the "bat.dat" data set,
bonsai.png May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms PNG Image - 365.6 KB - MD5: 961e874a3ddb5afc0a33bca1c5c4eab4 DocumentationExample Sample rendering of the "bonsai.dat" data set.
bunny.png May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms PNG Image - 416.5 KB - MD5: 47baea9a0693437950b3d0434c63de4e DocumentationExample Sample rendering of the "bunny.dat" data set.
chameleon.png May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms PNG Image - 755.9 KB - MD5: 2fc4fd894d55d9cec4e529f0b97a11e1 DocumentationExample Sample rendering of the "chameleon.dat" data set.
engine.png May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms PNG Image - 535.9 KB - MD5: dacdc0f05bbeaf0878d846e4cac6c659 DocumentationExample Sample rendering of the "engine.dat" data set.
exp2mill_crop.png May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms PNG Image - 1.6 MB - MD5: 1471f8e9e4256719d4a46d59088e5b2e DocumentationExample Sample rendering of the "exp2mill_signed_distance_00030.mmpld" data set.

Seed_sequences.fasta

Jun 1, 2020 - Seed sequences for the Glycoside Hydrolase 19 Engineering Database

Unknown - 20.3 KB -

FASTA headers comprise (from left to right): number of the seed sequence; sequence identifier (sid) in the GH19ED database; protein identifier (pid) in the GH19ED database; Uniprot or NCBI accession.

CHITs_60_percent_identity_cutoff.graphml

Jun 1, 2020 - GraphML files for protein sequence networks of glycoside hydrolase 19 homologues

GraphML Network Data - 14.3 MB -

Protein sequence network for the chitinase domains from the Glycoside Hydrolase 19 Engineering Database. The GraphML file contains representative nodes (clustered by 90% in USEARCH) connected by at least 60% pairwise sequence identity (edge weights derived from Needleman-Wunsch alignments).

ELYSs_60_percent_identity_cutoff.graphml

Jun 1, 2020 - GraphML files for protein sequence networks of glycoside hydrolase 19 homologues

GraphML Network Data - 5.6 MB -

Protein sequence network for the endolysin domains from the Glycoside Hydrolase 19 Engineering Database. The GraphML file contains representative nodes (clustered by 90% in USEARCH) connected by at least 60% pairwise sequence identity (edge weights derived from Needleman-Wunsch alignments).

GH19_40_percent_identity_cutoff.graphml

Jun 1, 2020 - GraphML files for protein sequence networks of glycoside hydrolase 19 homologues

GraphML Network Data - 72.1 MB -

Protein sequence network for representative GH19 domains (corresponding to Pfam’s GH19 profile HMM: PF00182) from the Glycoside Hydrolase 19 Engineering Database. The GraphML file contains representative nodes (clustered by 90% in USEARCH) connected by at least 40% pairwise sequence identity (edge weights derived from Needleman-Wunsch alignments).

bat.png

May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms

PNG Image - 668.2 KB -

DocumentationExample

Sample rendering of the "bat.dat" data set,

bonsai.png

May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms

PNG Image - 365.6 KB -

DocumentationExample

Sample rendering of the "bonsai.dat" data set.

bunny.png

May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms

PNG Image - 416.5 KB -

DocumentationExample

Sample rendering of the "bunny.dat" data set.

chameleon.png

May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms

PNG Image - 755.9 KB -

DocumentationExample

Sample rendering of the "chameleon.dat" data set.

engine.png

May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms

PNG Image - 535.9 KB -

DocumentationExample

Sample rendering of the "engine.dat" data set.

exp2mill_crop.png

May 28, 2020 - Runtime performance measurements of interactive visualisation algorithms

PNG Image - 1.6 MB -

DocumentationExample

Sample rendering of the "exp2mill_signed_distance_00030.mmpld" data set.

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