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B04: Hybrid discrete-continuum models for fractured porous media: model choice and random field/network generation logo
Apr 22, 2020SFB 1313 "Interface-Driven Multi-Field Processes in Porous Media"
Fractured porous media are geometrically very complex. There are many competing model concepts to represent their structure in flow simulations; these models differ drastically in their level of geo¬metric detail and in their level of simplification and abstraction. Systematically choosing between these vastly different models, calibrating chosen m...
Apr 9, 2020 - Expansin Engineering Database
Lohoff, Caroline, 2020, "Conserved positions in expansin homologues", https://doi.org/10.18419/DARUS-735, DaRUS, V1, UNF:6:HemykMznkJ0tyrf89mswkg== [fileUNF]
Conserved positions in the N- and C-terminal expansin domains of different groups from the Expansin Engineering Database (occurring in at least 70% of the annotated sequence entries). The expansin domains were annotated using hmmscan (from the HMMER software suite) against all sequence entries in the Expansin Engineering Database.
Apr 9, 2020 - Expansin Engineering Database
Buchholz, Patrick C. F., 2020, "Expansin homologues in actinobacterial genomes from South Africa", https://doi.org/10.18419/DARUS-699, DaRUS, V1
Hit sequences for putative expansins (or expansin domains) are reported from an exemplary genome screening. Five actinobacterial genomes were selected to show the application of the Expansin Engineering Database (ExED) for the identification of expansin domains. The original nucleic acid sequences were translated by the standard codon usage table i...
Apr 9, 2020 - Expansin Engineering Database
Lohoff, Caroline, 2020, "Occurrence of expansins in the tree of life", https://doi.org/10.18419/DARUS-693, DaRUS, V1, UNF:6:eK0oQia4QiaiEO0m1BJFeA== [fileUNF]
Comparison between expansins found in the Expansin Engineering Database (ExED) and literature.
Apr 6, 2020 - Tutorials & Manuals
Schäfer, Richard A.; Lott, Steffen C.; Georg, Jens; Grüning, Björn; Hess, Wolfgang; Voß, Björn, 2020, "GLASSgo Setup & Usage", https://doi.org/10.18419/DARUS-517, DaRUS, V2
Instruction video to install and use GLASSgo on multiple resources (e.g., Docker, Galaxy, web server). GLASSgo is available at Github with instructions and application data and is distributed under the MIT license. Furthermore, GLASSgo can applied using the RNA Workbench Server or the GLASSgo Web Server
Expansin Engineering Database(Universität Stuttgart)
Apr 2, 2020Bioinformatics
Supporting information and original files for bioinformatic investigations using the Expansin Engineering Database (https://exed.biocatnet.de/)
MiMiCry SPP 2170(Universität Stuttgart)
Mar 12, 2020SPP 2170 InterZell
Mar 12, 2020 - Publication: An open, modular, and flexible micro X-ray computed tomography system for research
Ruf, Matthias; Steeb, Holger, 2020, "micro-XRCT data set of open-pored asphalt concrete", https://doi.org/10.18419/DARUS-639, DaRUS, V1
micro-XRCT data set (projection and reconstructed images) resulting from a region of interest scan (diameter 48.41 mm, height 35.46 mm) located in the center of an open-pored asphalt concrete core with 100 mm diameter and 50 mm length.
Mar 10, 2020Publications
This dataverse includes the micro-XRCT data sets which are presented in: Ruf, M., & Steeb, H. (2020). An open, modular, and flexible micro X-ray computed tomography system for research. Review of Scientific Instruments, 91(11), 113102. https://doi.org/10.1063/5.0019541
Mar 5, 2020 - Publication: Digital rock physics and laboratory considerations on a high-porosity volcanic rock
Schepp, Laura L.; Ahrens, Benedikt; Balcewicz, Martin; Duda, Mandy; Nehler, Mathias; Osorno, Maria; Uribe, David; Steeb, Holger; Nigon, Benoit; Stöckhert, Ferdinand; Swanson, Donald A.; Siegert, Mirko; Gurris, Marcel; Saenger, Erik H.; Ruf, Matthias, 2020, "Digital rock physics and laboratory considerations on a high-porosity volcanic rock: micro-XRCT data sets", https://doi.org/10.18419/DARUS-680, DaRUS, V1
Reticulite (high-porosity volcanic rock) is a pyroclastic rock formed during intense Hawaiian fountaining events. The honeycombed network of bubbles is supported by glassy threads and forms a structure with a porosity of more than 80 %. It is an end-member for high-porosity materials with a high stiffness and brittleness. For this specific material...
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