SimTech EXC 2075 Project Network 2 "In silico models of coupled biological systems"
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CollectingDataByBioCatHubAndVisualisation.ipynb
Feb 15, 2022 - Propioin Synthesis using Benzoin Aldolase
Jupyter Notebook - 20.9 KB - MD5: bc9c3f0840a676ccdc6b8804a5aaf583
Jupyter Notebook that was used to model the given OMEX EnzymeML archive
PropioinSynthesis_Spoering.omex
Feb 15, 2022 - Propioin Synthesis using Benzoin Aldolase
Plain Text - 3.3 KB - MD5: 344913d82c8cf442d7332088fcfcbf4b
ABTS_Measurement.omex
Feb 15, 2022 - Oxidation of ABTS by Trametes versicolor laccase
Plain Text - 7.8 KB - MD5: 63e5dea9ce74e53c79186ed4999cfef5
InsightIntoMechanismByModelling.ipynb
Feb 15, 2022 - Oxidation of ABTS by Trametes versicolor laccase
Jupyter Notebook - 339.6 KB - MD5: d90e44f2274a452074895e7fb6217e9f
Jupyter Notebook used to model the data given in the OMEX EnzymeML archive
EnzymeML_Lagerman.omex
Feb 15, 2022 - Synthesis and Hydrolysis of Cephalexin
Plain Text - 5.9 KB - MD5: 6d77930a7448abb093a9d772af571261
DeactivationOfGlucoseOxidase_Host.omex
Feb 15, 2022 - Deactivation of Glucose Oxidase
Plain Text - 10.5 KB - MD5: 7961fc2b94cc8cef2ae4d143021394e0
MeasuringTheStabilityOfEnzymes.ipynb
Feb 15, 2022 - Deactivation of Glucose Oxidase
Jupyter Notebook - 67.5 KB - MD5: a27c8e9315c2731e6a28252f90069a5e
Jupyter Notebook used to model the given OMEX EnzymeML archive
AnalysingTimeCourseDataUsingMichaelisMenten.ipynb
Feb 15, 2022 - Carboligation of Pyruvate catalysed by HcAHAS C Unit
Jupyter Notebook - 164.0 KB - MD5: 9c8c06214cdad3b844fe75bed36dcbe1
Jupyter notebook that was used to model the OMEX archive found in this dataset.
CarboligationOfPyruvateCatalysedByHcAHAS_C_unit_Malzacher.omex
Feb 15, 2022 - Carboligation of Pyruvate catalysed by HcAHAS C Unit
Plain Text - 3.8 KB - MD5: d18217f667b4c14a4c3b1f0c0e20f148
Resulting OMEX file that was generated from the EnzymeML spreadsheet found in this dataset.
EnzymeML_pH5,5.xlsm
Feb 15, 2022 - Carboligation of Pyruvate catalysed by HcAHAS C Unit
MS Excel Spreadsheet - 106.2 KB - MD5: d27c384e4570a77200f194f140074a4b
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