PN 2

SimTech EXC 2075 Project Network 2 "In silico models of coupled biological systems"

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191 to 200 of 231 Results

Densities of simulated aqueous glycerol mixtures Oct 28, 2022 - FAIR Fluids Gültig, Matthias; Range, Jan Peter; Schmitz, Benjamin; Pleiss, Jürgen, 2022, "Densities of simulated aqueous glycerol mixtures", https://doi.org/10.18419/DARUS-3113, DaRUS, V1 In order to make thermophysical properties of complex liquid mixtures available to a comprehensive analysis, we developed a data management and analysis platform based on the standard data exchange format ThermoML. The practicability of integrating thermophysical data from experiment and simulation was demonstrated for two binary mixtures, methanol...
sim_dens_glyc.xml Oct 28, 2022 - Densities of simulated aqueous glycerol mixtures XML - 32.9 KB - MD5: c87b7b19bcb5f9c3c7259f3fdde8a727
arm26: A Human Arm Model Oct 6, 2022 - demoa Wochner, Isabell; Schmitt, Syn, 2022, "arm26: A Human Arm Model", https://doi.org/10.18419/DARUS-2871, DaRUS, V2 An arm model parametrised using generic literature data for the geometry of the skeleton including attachment points for ligaments and muscles. This arm26 model consists of a musculoskeletal model of the arm with two degrees of freedom actuated by six muscles. The model is prepared to run muscle-driven simulation using a simple biological motor con...
arm26.tgz Oct 6, 2022 - arm26: A Human Arm Model Compressed Archive - 16.6 MB - MD5: fe30c7f2688fe1072cacef772ed7c760 Contains all files for the model, including the technical description and a readme file how to use/run the model.
README.md Oct 6, 2022 - arm26: A Human Arm Model Markdown Text - 6.0 KB - MD5: a61be801b2895d063bd1b27339baf96b This file describes how to install and use the model and how to run a first simple simulation.
Technical_Report_Allmin.pdf Jun 13, 2022 - allmin: A Reduced Human All-Body Model Adobe PDF - 1.4 MB - MD5: 51534f2243252e2f6177e836abb3c2f1 Supplementary material describing the allmin model.
Data for: FAIR and scalable management of small-angle X-ray scattering data Jun 9, 2022 - SFB 1333 A4 - Bruckner group Giess, Torsten; Itzigehl, Selina; Range, Jan Peter; Bruckner, Johanna R.; Pleiss, Jürgen, 2022, "Data for: FAIR and scalable management of small-angle X-ray scattering data", https://doi.org/10.18419/DARUS-2842, DaRUS, V1 This dataset contains small-angle X-ray scattering (SAXS) measurements on various octyltrimethylammonium bromide (OTAB)/water and octyltrimethylammonium chloride (OTAC)/water mixtures at different mass fractions and temperatures, as well as analysis and visualization data thereof. The data and metadata are contained within an archive adhering to th...
fairsaxs_220512.zip Jun 9, 2022 - Data for: FAIR and scalable management of small-angle X-ray scattering data ZIP Archive - 19.1 MB - MD5: b8450cff6b02da9cf7fe60041bc97f1d
Technical_Report_Arm26.pdf Jun 7, 2022 - arm26: A Human Arm Model Adobe PDF - 2.1 MB - MD5: d2898df7ed2494f15f85c9e1de996557 Supplementary material describing the arm26 model.
Catalysis of L-cysteine by IscS in the presence of IscU Feb 15, 2022 - EnzymeML at work Pinto, Maria Filipa, 2022, "Catalysis of L-cysteine by IscS in the presence of IscU", https://doi.org/10.18419/DARUS-2483, DaRUS, V1 Measured was the reaction from cysteine to alanine by the Cysteine desulfurase, for six different initial concentrations of cysteine. The data consists of three data points over the course of 2.5 minutes for alanine. Additionally, the concentration of cysteine over time was calculated from the given values, for the later modelling.

Densities of simulated aqueous glycerol mixtures

Oct 28, 2022 - FAIR Fluids

Gültig, Matthias; Range, Jan Peter; Schmitz, Benjamin; Pleiss, Jürgen, 2022, "Densities of simulated aqueous glycerol mixtures", https://doi.org/10.18419/DARUS-3113, DaRUS, V1

In order to make thermophysical properties of complex liquid mixtures available to a comprehensive analysis, we developed a data management and analysis platform based on the standard data exchange format ThermoML. The practicability of integrating thermophysical data from experiment and simulation was demonstrated for two binary mixtures, methanol...

sim_dens_glyc.xml

Oct 28, 2022 - Densities of simulated aqueous glycerol mixtures

XML - 32.9 KB -

arm26: A Human Arm Model

Oct 6, 2022 - demoa

Wochner, Isabell; Schmitt, Syn, 2022, "arm26: A Human Arm Model", https://doi.org/10.18419/DARUS-2871, DaRUS, V2

An arm model parametrised using generic literature data for the geometry of the skeleton including attachment points for ligaments and muscles. This arm26 model consists of a musculoskeletal model of the arm with two degrees of freedom actuated by six muscles. The model is prepared to run muscle-driven simulation using a simple biological motor con...

arm26.tgz

Oct 6, 2022 - arm26: A Human Arm Model

Compressed Archive - 16.6 MB -

Contains all files for the model, including the technical description and a readme file how to use/run the model.

README.md

Oct 6, 2022 - arm26: A Human Arm Model

Markdown Text - 6.0 KB -

This file describes how to install and use the model and how to run a first simple simulation.

Technical_Report_Allmin.pdf

Jun 13, 2022 - allmin: A Reduced Human All-Body Model

Adobe PDF - 1.4 MB -

Supplementary material describing the allmin model.

Data for: FAIR and scalable management of small-angle X-ray scattering data

Jun 9, 2022 - SFB 1333 A4 - Bruckner group

Giess, Torsten; Itzigehl, Selina; Range, Jan Peter; Bruckner, Johanna R.; Pleiss, Jürgen, 2022, "Data for: FAIR and scalable management of small-angle X-ray scattering data", https://doi.org/10.18419/DARUS-2842, DaRUS, V1

This dataset contains small-angle X-ray scattering (SAXS) measurements on various octyltrimethylammonium bromide (OTAB)/water and octyltrimethylammonium chloride (OTAC)/water mixtures at different mass fractions and temperatures, as well as analysis and visualization data thereof. The data and metadata are contained within an archive adhering to th...

fairsaxs_220512.zip

Jun 9, 2022 - Data for: FAIR and scalable management of small-angle X-ray scattering data

ZIP Archive - 19.1 MB -

Technical_Report_Arm26.pdf

Jun 7, 2022 - arm26: A Human Arm Model

Adobe PDF - 2.1 MB -

Supplementary material describing the arm26 model.

Catalysis of L-cysteine by IscS in the presence of IscU

Feb 15, 2022 - EnzymeML at work

Pinto, Maria Filipa, 2022, "Catalysis of L-cysteine by IscS in the presence of IscU", https://doi.org/10.18419/DARUS-2483, DaRUS, V1

Measured was the reaction from cysteine to alanine by the Cysteine desulfurase, for six different initial concentrations of cysteine. The data consists of three data points over the course of 2.5 minutes for alanine. Additionally, the concentration of cysteine over time was calculated from the given values, for the later modelling.

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