Department of Biochemistry

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Publication Year: 2024

1 to 10 of 249 Results

NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Aug 12, 2024 - Amplicon based bisulfite NGS data Jeltsch, Albert; Bashtrykov, Pavel; Rajaram, Nivethika, 2024, "NGS data related to Rajaram et al.: Allele specific DNA demethylation ...", https://doi.org/10.18419/darus-4230, DaRUS, V2 Method overview To achieve targeted locus and allele-specific DNA demethylation, HEK293 cells were transfected with two plasmids. One plasmid contains, dCas9 fused to a SunTag with five repeats of the GCN4 peptide, separated by 22 aa long linkers, and scFv-fused TET1CD, as well a...
Sample list_v4.xlsx Aug 12, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... MS Excel Spreadsheet - 20.9 KB - MD5: 1043e2ae35d805a68dced1d64ccf5772 Information about the uploaded sequencing files.
A011_FKDL220432676-1A_HGLKMDRX2_L1_1.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 238.8 MB - MD5: 05a29e71ba2585fed9b74305d8d72203
A011_FKDL220432676-1A_HGLKMDRX2_L1_2.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 239.5 MB - MD5: 968e236965a02405f40fdf91c34ce8ca
A012_FKDL220432676-1A_HGLKMDRX2_L1_1.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 235.0 MB - MD5: 81527a49eec8e31d2a1518905c86a1c1
A012_FKDL220432676-1A_HGLKMDRX2_L1_2.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 237.8 MB - MD5: 3b8809419bac23661184c84af37144d3
A021_FKDL220432677-1A_HGLKMDRX2_L1_1.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 223.4 MB - MD5: a331a654d67e68004fcce1485e609dbf
A021_FKDL220432677-1A_HGLKMDRX2_L1_2.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 228.5 MB - MD5: 1b4708bad7241937484903d585427ffc
A022_FKDL220432677-1A_HGLKMDRX2_L1_1.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 232.4 MB - MD5: beab5543a6b22d62572a16ca5d035e8b
A022_FKDL220432677-1A_HGLKMDRX2_L1_2.fq.gz Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ... Gzip Archive - 222.0 MB - MD5: 2e30a70baf229fd0c81ba8f4fbbe2040

NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Aug 12, 2024 - Amplicon based bisulfite NGS data

Jeltsch, Albert; Bashtrykov, Pavel; Rajaram, Nivethika, 2024, "NGS data related to Rajaram et al.: Allele specific DNA demethylation ...", https://doi.org/10.18419/darus-4230, DaRUS, V2

Method overview To achieve targeted locus and allele-specific DNA demethylation, HEK293 cells were transfected with two plasmids. One plasmid contains, dCas9 fused to a SunTag with five repeats of the GCN4 peptide, separated by 22 aa long linkers, and scFv-fused TET1CD, as well a...

Sample list_v4.xlsx

Aug 12, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

MS Excel Spreadsheet - 20.9 KB -

Information about the uploaded sequencing files.

A011_FKDL220432676-1A_HGLKMDRX2_L1_1.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 238.8 MB -

A011_FKDL220432676-1A_HGLKMDRX2_L1_2.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 239.5 MB -

A012_FKDL220432676-1A_HGLKMDRX2_L1_1.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 235.0 MB -

A012_FKDL220432676-1A_HGLKMDRX2_L1_2.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 237.8 MB -

A021_FKDL220432677-1A_HGLKMDRX2_L1_1.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 223.4 MB -

A021_FKDL220432677-1A_HGLKMDRX2_L1_2.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 228.5 MB -

A022_FKDL220432677-1A_HGLKMDRX2_L1_1.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 232.4 MB -

A022_FKDL220432677-1A_HGLKMDRX2_L1_2.fq.gz

Aug 8, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...

Gzip Archive - 222.0 MB -

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