11 to 20 of 23 Results
May 20, 2021 - Glycoside Hydrolase 19 Engineering Database
Buchholz, Patrick C. F., 2021, "Sequence cross-references and taxonomic lineage for glycoside hydrolase family 19", https://doi.org/10.18419/darus-1163, DaRUS, V1, UNF:6:zi8TRxkq1C/pCN14pXTA0Q== [fileUNF]
The Glycoside Hydrolase 19 Engineering Database (GH19ED) contains information on protein sequences and structures of glycoside hydrolases from family 19. This dataset lists cross-references to the National Center for Biotechnology Information (NCBI), cross-references to the Prote... |
Tabular Data - 5.0 MB - 9 Variables, 22461 Observations - UNF:6:zi8TRxkq1C/pCN14pXTA0Q==
|
May 12, 2021
Buchholz, Patrick C. F., 2021, "Consensus sequences of arylsulfatases and phosphonate monoester hydrolases", https://doi.org/10.18419/darus-1838, DaRUS, V1
A multiple sequence alignment was constructed by Clustal Omega for the 95 protein sequences annotated as homologues of arylsulfatases and the 85 protein sequences annotated as homologues of phosphonate monoester hydrolases, respectively. The HMMER software suite was used to deriv... |
Unknown - 72.6 KB -
MD5: f61c99b2a140570ea632e7cf082d8def
Multiple sequence alignment in Clustal format for 95 homologues of arylsulfatases |
Unknown - 570 B -
MD5: 4f58daa6a2c326c5c78d7865df3fa249
FASTA file containing the consensus protein sequence of arylsulfatases based on the profile hidden Markov model in AS.hmm |
Unknown - 248.9 KB -
MD5: 9358f8cc4686a19d62f3d765e0a5e35d
Profile hidden Markov model in HMMER3 format based on the multiple sequence alignment in AS.aln |
Unknown - 61.7 KB -
MD5: 68593cdf74879917c223c38d1a5de53d
Multiple sequence alignment in Clustal format for 85 homologues of phosphonate monoester hydrolases |
Unknown - 533 B -
MD5: 0ed2f30d99bb5097faa06a79bed43ada
FASTA file containing the consensus protein sequence of phosphonate monoester hydrolases based on the profile hidden Markov model in PMH.hmm |
Unknown - 232.1 KB -
MD5: a570ab6b46dedfc2dffaea46aa542445
Profile hidden Markov model in HMMER3 format based on the multiple sequence alignment in PMH.aln |
May 3, 2021
Heberlein, Magdalena, 2021, "Protein sequences of arylsulfatases, phosphonate monoester hydrolases, and reconstructed ancestors", https://doi.org/10.18419/darus-1801, DaRUS, V1
Protein sequences were derived from a maximum-likelihood phylogenetic tree for arylsulfatases and phosphonate monoester hydrolases, including a selection of reconstructed ancestral sequences. |