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41 to 50 of 55 Results
Propioin Synthesis using Benzoin Aldolase
Feb 15, 2022 - EnzymeML at work
Spöring, Jan-Dirk, 2022, "Propioin Synthesis using Benzoin Aldolase", https://doi.org/10.18419/darus-2466, DaRUS, V1
Investigated was the ligation of two molecules propanal in organic conditions, catalysed by the benzoin aldolase, which was added in the form of lyophillised whole cells. The reaction was performed in triplicate, with 200 mM as the starting concentration of the propanal in all ca...
Protein sequences of arylsulfatases, phosphonate monoester hydrolases, and reconstructed ancestors
May 3, 2021 - Bioinformatics
Heberlein, Magdalena, 2021, "Protein sequences of arylsulfatases, phosphonate monoester hydrolases, and reconstructed ancestors", https://doi.org/10.18419/darus-1801, DaRUS, V1
Protein sequences were derived from a maximum-likelihood phylogenetic tree for arylsulfatases and phosphonate monoester hydrolases, including a selection of reconstructed ancestral sequences.
Python scripts related to MD simulations in "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects"
Feb 1, 2022 - MD Simulations
Jeltsch, Albert; Schnee, Philipp; Pleiss, Jürgen, 2022, "Python scripts related to MD simulations in "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects"", https://doi.org/10.18419/darus-2463, DaRUS, V1
Python scripts used for the Molecular Dynamics Simulation presented in "Preferential interaction of DNMT3A subunits containing the R882H cancer mutation leads to dominant changes of flanking sequence effects"
Query sequences for the update of the ExED
Jan 30, 2020 - Expansin Engineering Database
Lohoff, Caroline; Buchholz, Patrick C. F., 2020, "Query sequences for the update of the ExED", https://doi.org/10.18419/darus-622, DaRUS, V1, UNF:6:eFcDsa8udm3F11lB7M2q6w== [fileUNF]
Query sequences for the individual BLAST searches used to update the Expansin Engineering Database (ExED, https://exed.biocatnet.de/).
Query sequences for the update of the LccED
Jan 27, 2020 - Bioinformatics
Zeil, Catharina; Buchholz, Patrick C. F., 2020, "Query sequences for the update of the LccED", https://doi.org/10.18419/darus-559, DaRUS, V1, UNF:6:hIeqwMgxpY0QZZZ4FAMRvg== [fileUNF]
Query sequences for the individual BLAST searches used to update the Laccase and Multicopper Oxidase Engineering Database (LccED, https://lcced.biocatnet.de/).
Seed sequences for the Glycoside Hydrolase 19 Engineering Database
Jun 1, 2020 - Glycoside Hydrolase 19 Engineering Database
Orlando, Marco, 2020, "Seed sequences for the Glycoside Hydrolase 19 Engineering Database", https://doi.org/10.18419/darus-804, DaRUS, V1
Query sequences for the individual BLAST searches used to initialize the Glycoside Hydrolase 19 Engineering Database (GH19ED, https://gh19ed.biocatnet.de/).
Self-diffusion coefficients of experimental aqueous glycerol mixtures
Oct 28, 2022 - ThermoML
Gültig, Matthias; Range, Jan Peter; Schmitz, Benjamin; Pleiss, Jürgen, 2022, "Self-diffusion coefficients of experimental aqueous glycerol mixtures", https://doi.org/10.18419/darus-3119, DaRUS, V1
In order to make thermophysical properties of complex liquid mixtures available to a comprehensive analysis, we developed a data management and analysis platform based on the standard data exchange format ThermoML. The practicability of integrating thermophysical data from experi...
Self-diffusion coefficients of simulated aqueous glycerol mixtures
Oct 28, 2022 - ThermoML
Gültig, Matthias; Range, Jan Peter; Schmitz, Benjamin; Pleiss, Jürgen, 2022, "Self-diffusion coefficients of simulated aqueous glycerol mixtures", https://doi.org/10.18419/darus-3115, DaRUS, V1
In order to make thermophysical properties of complex liquid mixtures available to a comprehensive analysis, we developed a data management and analysis platform based on the standard data exchange format ThermoML. The practicability of integrating thermophysical data from experi...
Self-diffusion coefficients of simulated aqueous methanol mixtures
Oct 28, 2022 - ThermoML
Gültig, Matthias; Range, Jan Peter; Schmitz, Benjamin; Pleiss, Jürgen, 2022, "Self-diffusion coefficients of simulated aqueous methanol mixtures", https://doi.org/10.18419/darus-3114, DaRUS, V1
In order to make thermophysical properties of complex liquid mixtures available to a comprehensive analysis, we developed a data management and analysis platform based on the standard data exchange format ThermoML. The practicability of integrating thermophysical data from experi...
Sequence cross-references and taxonomic lineage for glycoside hydrolase family 19
May 20, 2021 - Glycoside Hydrolase 19 Engineering Database
Buchholz, Patrick C. F., 2021, "Sequence cross-references and taxonomic lineage for glycoside hydrolase family 19", https://doi.org/10.18419/darus-1163, DaRUS, V1, UNF:6:zi8TRxkq1C/pCN14pXTA0Q== [fileUNF]
The Glycoside Hydrolase 19 Engineering Database (GH19ED) contains information on protein sequences and structures of glycoside hydrolases from family 19. This dataset lists cross-references to the National Center for Biotechnology Information (NCBI), cross-references to the Prote...
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