31 to 40 of 52 Results
Müller, Christoph, 2020, "SFB/Transregio 161 Data Management Plan 2019-2023", https://doi.org/10.18419/darus-632, DaRUS, V1
The participating universities in SFB/Transregio 161 acknowledge the general importance of research data management as a vital issue for all of their work and provide increasing central support for long-term accessibility and reusability of data, documentation of methods and tool... |
Jun 16, 2020 - Expansin Engineering Database
Lohoff, Caroline, 2020, "Expansin domains in CBM63 sequences", https://doi.org/10.18419/darus-625, DaRUS, V2, UNF:6:p+wfgXpfeyT0/kJm49wLTA== [fileUNF]
The occurrence of N- and C-terminal expansin domains in CBM63 sequences from the CAZy database. Protein sequences are represented by NCBI accessions. Expansin domains were annotated with the hmmscan command from the HMMER software package. The hits were filtered by a minimal doma... |
Jun 16, 2020 - EICPModelCalibration
Hommel, Johannes, 2020, "EICP Model Calibration", https://doi.org/10.18419/darus-796, DaRUS, V1
EICP Model Calibration. Content: 1 excel spreadsheet with the experimental data 4 different model calibration sets in each .tar file: SorptionCoefficientsOnlyFitted.tar for the case where only the sorption coefficients of urease are fitted. SorptionCoefficientsAndConcentrationsFi... |
Jun 1, 2020 - Glycoside Hydrolase 19 Engineering Database
Orlando, Marco, 2020, "Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database", https://doi.org/10.18419/darus-803, DaRUS, V1
A starting alignment was built if other sequences with a known PDB structure were available, by performing a GH19 domain structure-based alignment generated through the mmaker command implemented in ChimeraX. Other seed sequences in the same superfamily were added to this fixed s... |
Jun 1, 2020 - Glycoside Hydrolase 19 Engineering Database
Orlando, Marco, 2020, "Seed sequences for the Glycoside Hydrolase 19 Engineering Database", https://doi.org/10.18419/darus-804, DaRUS, V1
Query sequences for the individual BLAST searches used to initialize the Glycoside Hydrolase 19 Engineering Database (GH19ED, https://gh19ed.biocatnet.de/). |
Jun 1, 2020 - Glycoside Hydrolase 19 Engineering Database
Orlando, Marco, 2020, "GraphML files for protein sequence networks of glycoside hydrolase 19 homologues", https://doi.org/10.18419/darus-802, DaRUS, V1
GraphML files for undirected weighted graphs with nodes that represent protein sequences of glycoside hydrolase 19 homologues. Protein sequences were clustered by a threshold of 90% sequence identity to derive representative sequences. Pairwise sequence identity between two seque... |
Bruder, Valentin; Müller, Christoph; Frey, Steffen; Ertl, Thomas, 2020, "Runtime performance measurements of interactive visualisation algorithms", https://doi.org/10.18419/darus-810, DaRUS, V1
Runtime performance measurements for GPU-based direct volume rendering and GPU-based raycasting of spherical particles on ten different discrete graphics processing units from AMD and NVIDIA. The data set at hand systematically evaluates typical factors influencing performance of... |
May 27, 2020 - Dennis Zink
Zink, Dennis, 2020, "Results and raw data of an adjustable similarity calculation for computer aided design (CAD) data", https://doi.org/10.18419/darus-813, DaRUS, V1
The here shown data results from a methodology for calculating the similarity of CAD parts. CAD parts are analyzed using various algorithms to find geometric features and discrete point cloud representations. The folder AnalyzedCADData contains a zip-file with the raw analyzed da... |
Apr 9, 2020 - Expansin Engineering Database
Lohoff, Caroline, 2020, "Conserved positions in expansin homologues", https://doi.org/10.18419/darus-735, DaRUS, V1, UNF:6:HemykMznkJ0tyrf89mswkg== [fileUNF]
Conserved positions in the N- and C-terminal expansin domains of different groups from the Expansin Engineering Database (occurring in at least 70% of the annotated sequence entries). The expansin domains were annotated using hmmscan (from the HMMER software suite) against all se... |
Apr 9, 2020 - Expansin Engineering Database
Buchholz, Patrick C. F., 2020, "Expansin homologues in actinobacterial genomes from South Africa", https://doi.org/10.18419/darus-699, DaRUS, V1
Hit sequences for putative expansins (or expansin domains) are reported from an exemplary genome screening. Five actinobacterial genomes were selected to show the application of the Expansin Engineering Database (ExED) for the identification of expansin domains. The original nucl... |
