SFB-TRR 161 INF "Collaboration Infrastructure"

Project INF supports the other projects of SFB/Transregio 161 by providing a central approach to data management and an infrastructure for virtual meetings in a large, high-resolution display scenario.

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1 to 10 of 367 Results

N_Multi_8_180.tdf Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality Hierarchical Data Format - 8.3 GB - MD5: 17a8463cd8bd77b1e9831c8afbeb18e6 An example TDF file obtained after imaging
Tissue_Embedding_Protocol.rtf Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality Rich Text Format - 7.7 KB - MD5: c24fdf932112ce5169ca3a2f50b9421d The protocol using in the tissue embedding of the samples
N_Multi_8_180_corr_phrt.zip Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality ZIP Archive - 16.2 GB - MD5: e61eeb632022e0cebdabcd74de078a88 An example image sequence obtained after reconstruction
Reconstruction_Protocol_STP.pdf Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality Adobe PDF - 115.6 KB - MD5: 126e03f72fa300a433a71b37e3779158 Processing steps and parameters for the reconstruction with STP v1.5.3
Brainacle.7z Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality Compressed Archive - 31.1 MB - MD5: 56c8698b29c1b94b17d0ab46b2625e52 Brainacle v1.0
BrainacleJ-0.5.0.jar Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality application/java-archive - 48.4 KB - MD5: 071badfee7646059973c9b3f40a59784 An ImageJ plugin to support the export of isosurface meshes to Brainacle
ImageJMacros.zip Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality ZIP Archive - 1.4 KB - MD5: 69355ea68ad0817fd873491ab91d81ff Contains: an installer macro for autorun, and two macros for the import and export of coordinates from and to Brainacle. For instructions see Metadata.
ImageJ_Preparation_(Volume_visualisation).pdf Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality Adobe PDF - 56.7 KB - MD5: 30eb4d3cc627fc675c44c25690412270 Steps to prepare an image sequence in ImageJ for volume visualisation in Brainacle
N_Multi_8_180.nii.zip Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality ZIP Archive - 206.3 MB - MD5: 2fc7b880c94319043cca4dec41238dba Example data for Brainacle
Volume-Volume Correlations.png Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality PNG Image - 42.3 KB - MD5: d7fdd93410b4182a35946b95b5945ef7 The figure referenced in the paper, showing the correlations between the two methods for each gross brain region.

N_Multi_8_180.tdf

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

Hierarchical Data Format - 8.3 GB -

An example TDF file obtained after imaging

Tissue_Embedding_Protocol.rtf

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

Rich Text Format - 7.7 KB -

The protocol using in the tissue embedding of the samples

N_Multi_8_180_corr_phrt.zip

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

ZIP Archive - 16.2 GB -

An example image sequence obtained after reconstruction

Reconstruction_Protocol_STP.pdf

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

Adobe PDF - 115.6 KB -

Processing steps and parameters for the reconstruction with STP v1.5.3

Brainacle.7z

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

Compressed Archive - 31.1 MB -

Brainacle v1.0

BrainacleJ-0.5.0.jar

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

application/java-archive - 48.4 KB -

An ImageJ plugin to support the export of isosurface meshes to Brainacle

ImageJMacros.zip

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

ZIP Archive - 1.4 KB -

Contains: an installer macro for autorun, and two macros for the import and export of coordinates from and to Brainacle. For instructions see Metadata.

ImageJ_Preparation_(Volume_visualisation).pdf

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

Adobe PDF - 56.7 KB -

Steps to prepare an image sequence in ImageJ for volume visualisation in Brainacle

N_Multi_8_180.nii.zip

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

ZIP Archive - 206.3 MB -

Example data for Brainacle

Volume-Volume Correlations.png

Jun 11, 2025 - Software and Data for: Interactive delineation and quantification of anatomical structure with virtual reality

PNG Image - 42.3 KB -

The figure referenced in the paper, showing the correlations between the two methods for each gross brain region.

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