Stuttgart Center for Simulation Science (SC SimTech)

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Deposit Date: 2022

1 to 10 of 34 Results

PDEBench Datasets Feb 13, 2024 - SciML PDE Benchmark Takamoto, Makoto; Praditia, Timothy; Leiteritz, Raphael; MacKinlay, Dan; Alesiani, Francesco; Pflüger, Dirk; Niepert, Mathias, 2022, "PDEBench Datasets", https://doi.org/10.18419/darus-2986, DaRUS, V8 This dataset contains benchmark data, generated with numerical simulation based on different PDEs, namely 1D advection, 1D Burgers', 1D and 2D diffusion-reaction, 1D diffusion-sorption, 1D, 2D, and 3D compressible Navier-Stokes, 2D Darcy flow, and 2D shallow water equation. This...
PDEBench Pretrained Models Nov 30, 2023 - SciML PDE Benchmark Takamoto, Makoto; Praditia, Timothy; Leiteritz, Raphael; MacKinlay, Dan; Alesiani, Francesco; Pflüger, Dirk; Niepert, Mathias, 2022, "PDEBench Pretrained Models", https://doi.org/10.18419/darus-2987, DaRUS, V2 This dataset contains the pretrained baseline models, namely FNO, U-Net, and PINN. These models are trained on different PDEs, such as 1D advection, 1D Burgers', 1D and 2D diffusion-reaction, 1D diffusion-sorption, 1D, 2D, and 3D compressible Navier-Stokes, 2D Darcy flow, and 2D...
Material for the paper "The possible role of lipid bilayer properties in the evolutionary disappearance of betaine lipids in seed plants." Jul 18, 2023 - BLinK Schlaich, Alexander, 2023, "Material for the paper "The possible role of lipid bilayer properties in the evolutionary disappearance of betaine lipids in seed plants."", https://doi.org/10.18419/darus-2360, DaRUS, V1 Simulation input scripts to produce the data presented in the manuscript "The possible role of lipid bilayer properties in the evolutionary disappearance of betaine lipids in seed plants." All simulations were carried out using the GROMACS simulation package. The folders contain...
Neck Reflex Behavior in Driving Simulator Experiments - Academic-Scale Simulator at ITM Jun 21, 2023 - Neck Reflex Behavior in Driving Simulator Experiments Kempter, Fabian; Lantella, Lorena; Stutzig, Norman; Fehr, Jörg; Siebert, Tobias, 2023, "Neck Reflex Behavior in Driving Simulator Experiments - Academic-Scale Simulator at ITM", https://doi.org/10.18419/darus-3000, DaRUS, V1 Neck movement and injury during a car crash is influenced by reflexes, strength, and flexibility. This data set contains in-vivo measurements of neck kinematics and reflexes as participants are rapidly accelerated while driving a mechanically simulated car. This data set includes...
Replication Data for: Port-Hamiltonian Fluid-Structure Interaction Modeling and Structure-Preserving Model Order Reduction of a Classical Guitar Apr 5, 2023 - Projects without PN Affiliation Rettberg, Johannes; Wittwar, Dominik; Buchfink, Patrick; Brauchler, Alexander; Ziegler, Pascal; Fehr, Jörg; Haasdonk, Bernard, 2023, "Replication Data for: Port-Hamiltonian Fluid-Structure Interaction Modeling and Structure-Preserving Model Order Reduction of a Classical Guitar", https://doi.org/10.18419/darus-3248, DaRUS, V1 This dataset includes the system matrices in velocity formulation and a parallel coordinates plot of the sensitivity analysis from the paper titled "Port-Hamiltonian Fluid-Structure Interaction Modeling and Structure-Preserving Model Order Reduction of a Classical Guitar". The sy...
Pre-trained and fine-tuned ANI models for: Transfer learning for chemically accurate interatomic neural network potentials Feb 20, 2023 - PN 6 Zaverkin, Viktor; Holzmüller, David; Bonfirraro, Luca; Kästner, Johannes, 2023, "Pre-trained and fine-tuned ANI models for: Transfer learning for chemically accurate interatomic neural network potentials", https://doi.org/10.18419/darus-3299, DaRUS, V1 Pre-trained and fine-tuned ANI models using the Gaussian Moments Neural Network (GM-NN) approach. Code for GM-NN implemented within the Tensorflow framework, including the respective documentation and tutorials, can be found on GitLab. The data represents TensorFlow v2 checkpoint...
Gaussian active learning on multi-resolution arbitrary polynomial chaos emulator Feb 15, 2023 - PN 5 Kohlhaas, Rebecca; Kröker, Ilja; Oladyshkin, Sergey; Nowak, Wolfgang, 2023, "Gaussian active learning on multi-resolution arbitrary polynomial chaos emulator", https://doi.org/10.18419/darus-2829, DaRUS, V1 This folder contains the code for the aMR-PC toolbox by Ilja Kröker in the version used for the code in GALMAP_code. This toolbox was also used for Kröker et al. 2022 Link to current version of the toolbox here Data This folder contains inputs and simulated outputs of the CO_2 be...
Code for: Seasonal Dynamics of Gaseous CO2 Concentrations in a Karst Cave Correspond With Aqueous Concentrations in a Stagnant Water Column Feb 13, 2023 - C04: Pore-scale and REV-scale approaches to biological and chemical pore-space alteration in porous media Keim, Leon; Class, Holger; Schirmer, Larissa; Strauch, Bettina; Wendel, Kai; Zimmer, Martin, 2023, "Code for: Seasonal Dynamics of Gaseous CO2 Concentrations in a Karst Cave Correspond With Aqueous Concentrations in a Stagnant Water Column", https://doi.org/10.18419/darus-3276, DaRUS, V1 This dataset contains the DuMux code for the simulations in https://doi.org/10.3390/geosciences13020051 For the detailed list of software used, please have a look at the file install_class2023.sh. To run the simulations at your own computer, please conduct the following steps: In...
Data for: Measurement Campaign of Gaseous CO2 Concentrations in a Karst Cave with Aqueous Concentrations in a Stagnant Water Column 2021-2022. Feb 13, 2023 - C04: Pore-scale and REV-scale approaches to biological and chemical pore-space alteration in porous media Keim, Leon; Class, Holger; Schirmer, Larissa; Wendel, Kai; Strauch, Bettina; Zimmer, Martin, 2023, "Data for: Measurement Campaign of Gaseous CO2 Concentrations in a Karst Cave with Aqueous Concentrations in a Stagnant Water Column 2021-2022.", https://doi.org/10.18419/darus-3271, DaRUS, V1 This dataset contains data generated during the measurement campaign inside the karst cave. The CO2 sensors in the cave air will continue to measure (as of Feb. 2023). For details on the site etc. see https://doi.org/10.3390/geosciences13020051 To create the graphs in the Class e...
Continuum-mechanical Forward Simulation Results of a Human Upper-limb Model Under Varying Muscle Activations Jan 30, 2023 - PN 7-6 Kneifl, Jonas; Rosin, David; Avci, Okan; Röhrle, Oliver; Fehr, Jörg, 2023, "Continuum-mechanical Forward Simulation Results of a Human Upper-limb Model Under Varying Muscle Activations", https://doi.org/10.18419/darus-3302, DaRUS, V1 This dataset provides simulation results from a high-fidelity human upper-arm finite element model under varying muscle activations and an example script to load the data. The upper arm model consists of the bones of the radius and ulna for the forearm and the humerus for the upp...

PDEBench Datasets

Feb 13, 2024 - SciML PDE Benchmark

Takamoto, Makoto; Praditia, Timothy; Leiteritz, Raphael; MacKinlay, Dan; Alesiani, Francesco; Pflüger, Dirk; Niepert, Mathias, 2022, "PDEBench Datasets", https://doi.org/10.18419/darus-2986, DaRUS, V8

This dataset contains benchmark data, generated with numerical simulation based on different PDEs, namely 1D advection, 1D Burgers', 1D and 2D diffusion-reaction, 1D diffusion-sorption, 1D, 2D, and 3D compressible Navier-Stokes, 2D Darcy flow, and 2D shallow water equation. This...

PDEBench Pretrained Models

Nov 30, 2023 - SciML PDE Benchmark

Takamoto, Makoto; Praditia, Timothy; Leiteritz, Raphael; MacKinlay, Dan; Alesiani, Francesco; Pflüger, Dirk; Niepert, Mathias, 2022, "PDEBench Pretrained Models", https://doi.org/10.18419/darus-2987, DaRUS, V2

This dataset contains the pretrained baseline models, namely FNO, U-Net, and PINN. These models are trained on different PDEs, such as 1D advection, 1D Burgers', 1D and 2D diffusion-reaction, 1D diffusion-sorption, 1D, 2D, and 3D compressible Navier-Stokes, 2D Darcy flow, and 2D...

Material for the paper "The possible role of lipid bilayer properties in the evolutionary disappearance of betaine lipids in seed plants."

Jul 18, 2023 - BLinK

Schlaich, Alexander, 2023, "Material for the paper "The possible role of lipid bilayer properties in the evolutionary disappearance of betaine lipids in seed plants."", https://doi.org/10.18419/darus-2360, DaRUS, V1

Simulation input scripts to produce the data presented in the manuscript "The possible role of lipid bilayer properties in the evolutionary disappearance of betaine lipids in seed plants." All simulations were carried out using the GROMACS simulation package. The folders contain...

Neck Reflex Behavior in Driving Simulator Experiments - Academic-Scale Simulator at ITM

Jun 21, 2023 - Neck Reflex Behavior in Driving Simulator Experiments

Kempter, Fabian; Lantella, Lorena; Stutzig, Norman; Fehr, Jörg; Siebert, Tobias, 2023, "Neck Reflex Behavior in Driving Simulator Experiments - Academic-Scale Simulator at ITM", https://doi.org/10.18419/darus-3000, DaRUS, V1

Neck movement and injury during a car crash is influenced by reflexes, strength, and flexibility. This data set contains in-vivo measurements of neck kinematics and reflexes as participants are rapidly accelerated while driving a mechanically simulated car. This data set includes...

Replication Data for: Port-Hamiltonian Fluid-Structure Interaction Modeling and Structure-Preserving Model Order Reduction of a Classical Guitar

Apr 5, 2023 - Projects without PN Affiliation

Rettberg, Johannes; Wittwar, Dominik; Buchfink, Patrick; Brauchler, Alexander; Ziegler, Pascal; Fehr, Jörg; Haasdonk, Bernard, 2023, "Replication Data for: Port-Hamiltonian Fluid-Structure Interaction Modeling and Structure-Preserving Model Order Reduction of a Classical Guitar", https://doi.org/10.18419/darus-3248, DaRUS, V1

This dataset includes the system matrices in velocity formulation and a parallel coordinates plot of the sensitivity analysis from the paper titled "Port-Hamiltonian Fluid-Structure Interaction Modeling and Structure-Preserving Model Order Reduction of a Classical Guitar". The sy...

Pre-trained and fine-tuned ANI models for: Transfer learning for chemically accurate interatomic neural network potentials

Feb 20, 2023 - PN 6

Zaverkin, Viktor; Holzmüller, David; Bonfirraro, Luca; Kästner, Johannes, 2023, "Pre-trained and fine-tuned ANI models for: Transfer learning for chemically accurate interatomic neural network potentials", https://doi.org/10.18419/darus-3299, DaRUS, V1

Pre-trained and fine-tuned ANI models using the Gaussian Moments Neural Network (GM-NN) approach. Code for GM-NN implemented within the Tensorflow framework, including the respective documentation and tutorials, can be found on GitLab. The data represents TensorFlow v2 checkpoint...

Gaussian active learning on multi-resolution arbitrary polynomial chaos emulator

Feb 15, 2023 - PN 5

Kohlhaas, Rebecca; Kröker, Ilja; Oladyshkin, Sergey; Nowak, Wolfgang, 2023, "Gaussian active learning on multi-resolution arbitrary polynomial chaos emulator", https://doi.org/10.18419/darus-2829, DaRUS, V1

This folder contains the code for the aMR-PC toolbox by Ilja Kröker in the version used for the code in GALMAP_code. This toolbox was also used for Kröker et al. 2022 Link to current version of the toolbox here Data This folder contains inputs and simulated outputs of the CO_2 be...

Code for: Seasonal Dynamics of Gaseous CO2 Concentrations in a Karst Cave Correspond With Aqueous Concentrations in a Stagnant Water Column

Feb 13, 2023 - C04: Pore-scale and REV-scale approaches to biological and chemical pore-space alteration in porous media

Keim, Leon; Class, Holger; Schirmer, Larissa; Strauch, Bettina; Wendel, Kai; Zimmer, Martin, 2023, "Code for: Seasonal Dynamics of Gaseous CO2 Concentrations in a Karst Cave Correspond With Aqueous Concentrations in a Stagnant Water Column", https://doi.org/10.18419/darus-3276, DaRUS, V1

This dataset contains the DuMux code for the simulations in https://doi.org/10.3390/geosciences13020051 For the detailed list of software used, please have a look at the file install_class2023.sh. To run the simulations at your own computer, please conduct the following steps: In...

Data for: Measurement Campaign of Gaseous CO2 Concentrations in a Karst Cave with Aqueous Concentrations in a Stagnant Water Column 2021-2022.

Feb 13, 2023 - C04: Pore-scale and REV-scale approaches to biological and chemical pore-space alteration in porous media

Keim, Leon; Class, Holger; Schirmer, Larissa; Wendel, Kai; Strauch, Bettina; Zimmer, Martin, 2023, "Data for: Measurement Campaign of Gaseous CO2 Concentrations in a Karst Cave with Aqueous Concentrations in a Stagnant Water Column 2021-2022.", https://doi.org/10.18419/darus-3271, DaRUS, V1

This dataset contains data generated during the measurement campaign inside the karst cave. The CO2 sensors in the cave air will continue to measure (as of Feb. 2023). For details on the site etc. see https://doi.org/10.3390/geosciences13020051 To create the graphs in the Class e...

Continuum-mechanical Forward Simulation Results of a Human Upper-limb Model Under Varying Muscle Activations

Jan 30, 2023 - PN 7-6

Kneifl, Jonas; Rosin, David; Avci, Okan; Röhrle, Oliver; Fehr, Jörg, 2023, "Continuum-mechanical Forward Simulation Results of a Human Upper-limb Model Under Varying Muscle Activations", https://doi.org/10.18419/darus-3302, DaRUS, V1

This dataset provides simulation results from a high-fidelity human upper-arm finite element model under varying muscle activations and an example script to load the data. The upper arm model consists of the bones of the radius and ulna for the forearm and the humerus for the upp...

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