1 to 10 of 21 Results
Jan 30, 2020 -
Query sequences for the update of the ExED
Unknown - 8.7 KB -
MD5: 4f5de838715758c51a8cf33de96da0e8
Seed (query) sequences for the initial setup of the ExED. Protein sequences are given in FASTA format. Headers correspond to sequence identifiers in the style of UniprotKB. |
Jan 30, 2020 -
Query sequences for the update of the ExED
Unknown - 6.5 KB -
MD5: 5ae0036abf33f3585e5629a8337b7039
Seed (query) sequences for the first update of the ExED (USEARCH centroid sequences). Protein sequences are given in FASTA format with one line per sequence. Headers correspond to sequence identifiers of the Expansin Engineering Database. |
Jan 30, 2020 -
Query sequences for the update of the ExED
Tabular Data - 505 B - 1 Variables, 25 Observations - UNF:6:eFcDsa8udm3F11lB7M2q6w==
Tabular file with headers: sequence identifier from the Expansin Engineering Database (1st column) and NCBI accession.version (2nd column). This file lists the sequence accessions used in the first update of the ExED. |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 2.8 KB -
MD5: 4fac8317bd493c0e87d9a2014528f6e8
Clustal alignment for the C-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 37.8 KB -
MD5: bff77f04191cafcd2319527717ff504a
Profile hidden Markov model in HMMER format for the C-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 3.4 KB -
MD5: 63ce826a9b671db8c19d19e59f7fa67f
Stockholm alignment for the C-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 4.6 KB -
MD5: 010dfcb74e481bcc072eb4bef298b5d8
Clustal alignment for the N-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 50.5 KB -
MD5: 84663760c0d987f0b92761ca71a83d6a
Profile hidden Markov model in HMMER format for the N-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 4.8 KB -
MD5: c82120b740d3867bc4b11a2fe5def375
Stockholm alignment for the N-terminal expansin domain |
GraphML Network Data - 70.6 MB -
MD5: 51c315706ee9f262b816ee2654172d0e
Protein sequence network for the bacterial, fungal, and plant superfamily from the Expansin Engineering Database (for sequences with length between 210 and 300 residues) including members of the CBM63 family (downloaded from the CAZy database on June 3, 2019). The GraphML file co... |