31 to 40 of 46 Results
GraphML Network Data - 20.8 MB -
MD5: 1bcf30f501153632979c2e032fe5a497
Protein sequence network for C-terminal expansin domains from the bacterial, fungal, and plant superfamily from the Expansin Engineering Database. The GraphML file contains representative nodes (clustered by 0.9 in USEARCH/ UCLUST) connected by at least 60% pairwise sequence iden... |
GraphML Network Data - 85.9 MB -
MD5: 6b7c3ee5702bf65837900503ef335e54
Protein sequence network for N-terminal expansin domains from the bacterial, fungal, and plant superfamily from the Expansin Engineering Database, for sequences with length between 210 and 300 residues.The GraphML file contains representative nodes (clustered by 0.9 in USEARCH/ U... |
Jan 30, 2020 - Expansin Engineering Database
Lohoff, Caroline, 2020, "Profile hidden Markov models of the ExED", https://doi.org/10.18419/darus-623, DaRUS, V1
Profile hidden Markov models and their underlying multiple sequence alignments for the N- and C-terminal protein domains of expansins. |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 2.8 KB -
MD5: 4fac8317bd493c0e87d9a2014528f6e8
Clustal alignment for the C-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 37.8 KB -
MD5: bff77f04191cafcd2319527717ff504a
Profile hidden Markov model in HMMER format for the C-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 3.4 KB -
MD5: 63ce826a9b671db8c19d19e59f7fa67f
Stockholm alignment for the C-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 4.6 KB -
MD5: 010dfcb74e481bcc072eb4bef298b5d8
Clustal alignment for the N-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 50.5 KB -
MD5: 84663760c0d987f0b92761ca71a83d6a
Profile hidden Markov model in HMMER format for the N-terminal expansin domain |
Jan 30, 2020 -
Profile hidden Markov models of the ExED
Unknown - 4.8 KB -
MD5: c82120b740d3867bc4b11a2fe5def375
Stockholm alignment for the N-terminal expansin domain |
Jan 30, 2020 - Expansin Engineering Database
Lohoff, Caroline; Buchholz, Patrick C. F., 2020, "Query sequences for the update of the ExED", https://doi.org/10.18419/darus-622, DaRUS, V1, UNF:6:eFcDsa8udm3F11lB7M2q6w== [fileUNF]
Query sequences for the individual BLAST searches used to update the Expansin Engineering Database (ExED, https://exed.biocatnet.de/). |