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11 to 20 of 56 Results
AS.hmm
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 248.9 KB - MD5: 9358f8cc4686a19d62f3d765e0a5e35d
Profile hidden Markov model in HMMER3 format based on the multiple sequence alignment in AS.aln
PMH.aln
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 61.7 KB - MD5: 68593cdf74879917c223c38d1a5de53d
Multiple sequence alignment in Clustal format for 85 homologues of phosphonate monoester hydrolases
PMH-consensus.fasta
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 533 B - MD5: 0ed2f30d99bb5097faa06a79bed43ada
FASTA file containing the consensus protein sequence of phosphonate monoester hydrolases based on the profile hidden Markov model in PMH.hmm
PMH.hmm
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 232.1 KB - MD5: a570ab6b46dedfc2dffaea46aa542445
Profile hidden Markov model in HMMER3 format based on the multiple sequence alignment in PMH.aln
AS_PMH_ancestors.fasta
May 3, 2021 - Protein sequences of arylsulfatases, phosphonate monoester hydrolases, and reconstructed ancestors
Unknown - 126.7 KB - MD5: 997793d158069bf670672467978a1688
FASTA file for 238 protein sequences
AS_PMH_ancestors.graphml
May 3, 2021 - GraphML file for homologues and reconstructed ancestors of arylsulfatases and phosphonate monoester hydrolases
GraphML Network Data - 2.2 MB - MD5: db9ccb4159a785f02c2e3ae2135d321f
GraphML formatted file for an undirected graph (network) containing 238 nodes connected by 28,203 edges.
CBM63_expansin_domains_score20.tab
Jun 16, 2020 - Expansin domains in CBM63 sequences
Tabular Data - 8.4 KB - 1 Variables, 567 Observations - UNF:6:i7aLIL6weIF8nhTjUBKf+g==
Tabular file with headers: CBM63 with both domains (1st column), CBM63 with N-terminal domain (2nd column), CBM63 with C-terminal domain (3rd column). The expansin domains were annotated using a minimal domain-based score of 20.
CHITs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 110.9 KB - MD5: 9c4c77ebc1b7f7a3c4c4f9bf713aa7fe
Profile hidden Markov model in HMMER format for the chitinase superfamily
ELYSs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 81.4 KB - MD5: 61d6a4adfde821f447d18458a00e7667
Profile hidden Markov model in HMMER format for the endolysin superfamily
Reference_alignment_CHITs.aln
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 15.9 KB - MD5: 1de23a931f1988e2e26fa21ca210605c
Clustal alignment for the profile hidden Markov model of the chitinase superfamily
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