Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Advanced Search

1 to 10 of 77 Results
APAP.tab
Sep 30, 2019 - The modular structure of alpha/beta-hydrolases: similarity of the N- and C-terminal domains to other proteins
Tabular Data - 11.9 KB - 9 Variables, 173 Observations - UNF:6:UT/tuDCkMGlPeUykEk1hsw==
APAP (acylaminoacyl peptidase from Aeropyrum pernix K1) spreadsheet of Supplements01-1.xlsx as csv
AS-consensus.fasta
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 570 B - MD5: 4f58daa6a2c326c5c78d7865df3fa249
FASTA file containing the consensus protein sequence of arylsulfatases based on the profile hidden Markov model in AS.hmm
AS.aln
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 72.6 KB - MD5: f61c99b2a140570ea632e7cf082d8def
Multiple sequence alignment in Clustal format for 95 homologues of arylsulfatases
AS.hmm
May 12, 2021 - Consensus sequences of arylsulfatases and phosphonate monoester hydrolases
Unknown - 248.9 KB - MD5: 9358f8cc4686a19d62f3d765e0a5e35d
Profile hidden Markov model in HMMER3 format based on the multiple sequence alignment in AS.aln
AS_PMH_ancestors.fasta
May 3, 2021 - Protein sequences of arylsulfatases, phosphonate monoester hydrolases, and reconstructed ancestors
Unknown - 126.7 KB - MD5: 997793d158069bf670672467978a1688
FASTA file for 238 protein sequences
AS_PMH_ancestors.graphml
May 3, 2021 - GraphML file for homologues and reconstructed ancestors of arylsulfatases and phosphonate monoester hydrolases
GraphML Network Data - 2.2 MB - MD5: db9ccb4159a785f02c2e3ae2135d321f
GraphML formatted file for an undirected graph (network) containing 238 nodes connected by 28,203 edges.
CBM63_expansin_domains_score20.tab
Jun 16, 2020 - Expansin domains in CBM63 sequences
Tabular Data - 8.4 KB - 1 Variables, 567 Observations - UNF:6:i7aLIL6weIF8nhTjUBKf+g==
Tabular file with headers: CBM63 with both domains (1st column), CBM63 with N-terminal domain (2nd column), CBM63 with C-terminal domain (3rd column). The expansin domains were annotated using a minimal domain-based score of 20.
CBM63_Sfams123_210-300_90_50.graphml
Jan 30, 2020 - GraphML files for protein sequence networks of expansin homologues
GraphML Network Data - 70.6 MB - MD5: 51c315706ee9f262b816ee2654172d0e
Protein sequence network for the bacterial, fungal, and plant superfamily from the Expansin Engineering Database (for sequences with length between 210 and 300 residues) including members of the CBM63 family (downloaded from the CAZy database on June 3, 2019). The GraphML file co...
CBM63sequences.tab
Jan 30, 2020 - Expansin domains in CBM63 sequences
Tabular Data - 8.1 KB - 1 Variables, 510 Observations - UNF:6:9nlqS8HIWJ5ngSIjGG58OQ==
Tabular file with headers: CBM63 with both domains (1st column), CBM63 with N-terminal domain (2nd column), CBM63 with C-terminal domain (3rd column). The expansin domains were annotated using a minimal domain-based score of 35.
CHITs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 110.9 KB - MD5: 9c4c77ebc1b7f7a3c4c4f9bf713aa7fe
Profile hidden Markov model in HMMER format for the chitinase superfamily
Add Data

Log in to create a dataverse or add a dataset.

Log In
Share Dataverse

Share this dataverse on your favorite social media networks.

Link Dataverse
Reset Modifications

Are you sure you want to reset the selected metadata fields? If you do this, any customizations (hidden, required, optional) you have done will no longer appear.