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1 to 10 of 18 Results
CHITs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 110.9 KB - MD5: 9c4c77ebc1b7f7a3c4c4f9bf713aa7fe
Profile hidden Markov model in HMMER format for the chitinase superfamily
ELYSs.hmm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 81.4 KB - MD5: 61d6a4adfde821f447d18458a00e7667
Profile hidden Markov model in HMMER format for the endolysin superfamily
Reference_alignment_CHITs.aln
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 15.9 KB - MD5: 1de23a931f1988e2e26fa21ca210605c
Clustal alignment for the profile hidden Markov model of the chitinase superfamily
Reference_alignment_CHITs.stockholm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 18.2 KB - MD5: 116056d1f562c17e3a2b0ebe8714d0fe
Stockholm alignment for the profile hidden Markov model of the chitinase superfamily
Reference_alignment_ELYSs.aln
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 394.5 KB - MD5: b30ebdc0bf4ad0af8b50c15f6339b5e7
Clustal alignment for the profile hidden Markov model of the endolysin superfamily
Reference_alignment_ELYSs.stockholm
Jun 1, 2020 - Profile hidden Markov models of the Glycoside Hydrolase 19 Engineering Database
Unknown - 419.3 KB - MD5: 88e1f79860f29df5626599bd48cfcff3
Stockholm alignment for the profile hidden Markov model of the endolysin superfamily
Seed_sequences.fasta
Jun 1, 2020 - Seed sequences for the Glycoside Hydrolase 19 Engineering Database
Unknown - 20.3 KB - MD5: 1961bf93199d823fa0fb953e5e120100
FASTA headers comprise (from left to right): number of the seed sequence; sequence identifier (sid) in the GH19ED database; protein identifier (pid) in the GH19ED database; Uniprot or NCBI accession.
hits_aa.fasta
Apr 9, 2020 - Expansin homologues in actinobacterial genomes from South Africa
Unknown - 1.3 KB - MD5: 00f8e0957e042214a2c935343fae28f9
FASTA file of protein sequences (amino acid symbols). The numbers in the headers correspond to the hits mentioned in the Supporting Information file from Lohoff et al. 2020.
hits_nt.fasta
Apr 9, 2020 - Expansin homologues in actinobacterial genomes from South Africa
Unknown - 4.0 KB - MD5: 7dbd7e182fdf07bf4bd300fbd68ed0a4
FASTA file of nucleic acid sequences. The numbers in the headers correspond to the hits mentioned in the Supporting Information file from Lohoff et al. 2020.
Expansins_CterminalDomain_2.aln
Jan 30, 2020 - Profile hidden Markov models of the ExED
Unknown - 2.8 KB - MD5: 4fac8317bd493c0e87d9a2014528f6e8
Clustal alignment for the C-terminal expansin domain
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