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21 to 30 of 1,362 Results
2_data_storage_and_embeddings.ipynb
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
Jupyter Notebook - 32.7 KB - MD5: 23d1c66d472cef8df61d1b4af946e138
3_data_science.ipynb
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
Jupyter Notebook - 15.3 KB - MD5: c9d86d81c81d45f0e504062f1a790448
fastas.zip
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
ZIP Archive - 222.7 MB - MD5: fff77ced43a39c8357ea141bd0b9fda8
DATA
graph_files.zip
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
ZIP Archive - 716.3 MB - MD5: ea8239d7f45d0b77460e1e953edb73cf
DATA
pyeed_BT.zip
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
ZIP Archive - 1.5 MB - MD5: abbf5ecb34f1c87e08aafab4c96cdb12
sequence_embeddings_random_seqs.h5
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
Plain Text - 217.0 MB - MD5: 8c2e24535dd2364974dbf0b0d929672c
DATA
sequence_embeddings_secs.h5
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
Plain Text - 11.8 GB - MD5: 485539ee436e914262f2d0440390b4f0
DATA
sequence_embeddings_supersecs.h5
Nov 27, 2024 - Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins
Plain Text - 4.8 GB - MD5: 0583bafc264a854ddaa5fa787780ae6d
DATA
NGS data related to Rajaram et al.: Allele specific DNA demethylation ...
Aug 12, 2024 - Amplicon based bisulfite NGS data
Jeltsch, Albert; Bashtrykov, Pavel; Rajaram, Nivethika, 2024, "NGS data related to Rajaram et al.: Allele specific DNA demethylation ...", https://doi.org/10.18419/DARUS-4230, DaRUS, V2
Method overview To achieve targeted locus and allele-specific DNA demethylation, HEK293 cells were transfected with two plasmids. One plasmid contains, dCas9 fused to a SunTag with five repeats of the GCN4 peptide, separated by 22 aa long linkers, and scFv-fused TET1CD, as well as a GFP reporter protein. The other plasmid is a multiguide plasmid wi...
Sample list_v4.xlsx
Aug 12, 2024 - NGS data related to Rajaram et al.: Allele specific DNA demethylation ...
MS Excel Spreadsheet - 20.9 KB - MD5: 1043e2ae35d805a68dced1d64ccf5772
Information about the uploaded sequencing files.
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