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301 to 310 of 16,109 Results
CBSD_Pypesto_Parameters_optimization_dictionary.json
Mar 21, 2025 - DLC1 knockdown in EMT in MCF10A cells
JSON - 931 B - MD5: b79c3cfb6b6ab7ceda22fd319c5337db
Dictionary containing the optimized parameter values
CBSD_single_reactions_SSA.xml
Mar 21, 2025 - DLC1 knockdown in EMT in MCF10A cells
XML - 34.5 KB - MD5: ee6c89ff248f53a6cbb07eabfef12fa7
SBML CBSD model for stochastic simulations - models all subreactions individually
get_boundaries_v9.ijm
Mar 21, 2025 - DLC1 knockdown in EMT in MCF10A cells
Unknown - 12.1 KB - MD5: e1a4c3d561bd5afb7abdf253deb07962
Script used for the IF images segmentation and analysis for classification into E-cad and N-Cad positive cells
MCMC_sampling_pypesto_workflow.py
Mar 21, 2025 - DLC1 knockdown in EMT in MCF10A cells
Python Source Code - 10.1 KB - MD5: 799aec9a1f707be058aceb3aee3f3bed
Python script to perform MCMC sampling on the CBSD model using the PEtab files
Pypesto_Parameter_Estimation.py
Mar 21, 2025 - DLC1 knockdown in EMT in MCF10A cells
Python Source Code - 3.4 KB - MD5: 7c6b8e987ef2a9a70be164d7cc7473de
Python script to calibrate the CBSD model using the PEtab files
plots_final.tar.xz
Mar 15, 2025 - Replication Data for: "Local Thermal Non-Equilibrium Models in Porous Media: A Comparative Study of Conduction effects"
XZ Archive - 12.6 MB - MD5: b3e29e2306a6a06bf5c395df3584453c
All final figures in the paper that were produced from simulation data are stored here.
postprocessing_Kostelecky2025a.tar.xz
Mar 15, 2025 - Replication Data for: "Local Thermal Non-Equilibrium Models in Porous Media: A Comparative Study of Conduction effects"
XZ Archive - 278.3 KB - MD5: b1be6d4a24e312a21f0d8e4212c2c4fc
The post-processing routine, to obtain the plots in the paper from the simulation data.
PD-GMRES_code_data.zip
Mar 11, 2025 - Matlab Code and Data for: Data-driven geometric parameter optimization for PD-GMRES
ZIP Archive - 93.1 MB - MD5: deee62e9da29f4e48fd62f63d7b64cf7
aminoacids.arn
Feb 14, 2025 - Supplementary material for "Influence of water content on thermophysical properties of aqueous glyceline solutions predicted by molecular dynamics simulations"
Unknown - 2.7 KB - MD5: 21769bda9bfa2de5eafb3f6153e472d9
aminoacids.c.tdb
Feb 14, 2025 - Supplementary material for "Influence of water content on thermophysical properties of aqueous glyceline solutions predicted by molecular dynamics simulations"
Unknown - 9 B - MD5: 47801a9c3bff40569e6d90cc744d8e3e
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