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Part 1: Document Description
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Citation |
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Title: |
Carboligation of Pyruvate catalysed by HcAHAS C Unit |
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Identification Number: |
doi:10.18419/darus-2470 |
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Distributor: |
DaRUS |
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Date of Distribution: |
2022-02-15 |
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Version: |
1 |
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Bibliographic Citation: |
Malzacher, Stephan, 2022, "Carboligation of Pyruvate catalysed by HcAHAS C Unit", https://doi.org/10.18419/darus-2470, DaRUS, V1 |
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Citation |
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Title: |
Carboligation of Pyruvate catalysed by HcAHAS C Unit |
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Identification Number: |
doi:10.18419/darus-2470 |
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Authoring Entity: |
Malzacher, Stephan (Forschungszentrum Jülich) |
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Software used in Production: |
PyEnzyme |
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Grant Number: |
EXC 2075 - 390740016 |
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Distributor: |
DaRUS |
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Access Authority: |
Malzacher, Stephan |
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Holdings Information: |
https://doi.org/10.18419/darus-2470 |
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Study Scope |
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Keywords: |
Chemistry, Medicine, Health and Life Sciences, Enzymology, Biocatalysis, Biotechnology, EnzymeML |
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Abstract: |
<p>The data was measured in the course of a Bachelor thesis and filled into the EnzymeML Spreadsheet. </p> <p>Measured was the absorption for the reaction from pyruvate to acetolactate. The measurements were conducted for six different pH values (in the range from pH 5 to pH8). For each of these measurements, a different Spreadsheet was created.</p> |
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Notes: |
This dataset includes the analysis of the enzyme kinetics at pH 7 for a demonstration of the workflow. The analysis can be reproduced by using the notebook attached to this dataset. In addition, the remaining pH studies were attached as spreadsheets, which can be converted using the <a href="https://enzymeml.sloppy.zone/#/EnzymeML%20spreadsheet/convert_template_template_convert_post">PyEnzyme REST-API</a>. In order to investigate the dataset, it is advised to use the <a href="https://github.com/EnzymeML/PyEnzyme">PyEnzyme</a> library. |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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Label: |
AnalysingTimeCourseDataUsingMichaelisMenten.ipynb |
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Text: |
Jupyter notebook that was used to model the OMEX archive found in this dataset. |
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Notes: |
application/x-ipynb+json |
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Label: |
CarboligationOfPyruvateCatalysedByHcAHAS_C_unit_Malzacher.omex |
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Text: |
Resulting OMEX file that was generated from the EnzymeML spreadsheet found in this dataset. |
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Notes: |
text/plain |
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Label: |
EnzymeML_pH5,5.xlsm |
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Notes: |
application/vnd.ms-excel.sheet.macroenabled.12 |
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Label: |
EnzymeML_pH6,5.xlsm |
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Notes: |
application/vnd.ms-excel.sheet.macroenabled.12 |
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Label: |
EnzymeML_pH6.xlsm |
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Notes: |
application/vnd.ms-excel.sheet.macroenabled.12 |
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Label: |
EnzymeML_pH7,6.xlsm |
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Notes: |
application/vnd.ms-excel.sheet.macroenabled.12 |
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Label: |
EnzymeML_pH7.xlsm |
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Notes: |
application/vnd.ms-excel.sheet.macroenabled.12 |
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Label: |
EnzymeML_pH8.xlsm |
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Notes: |
application/vnd.ms-excel.sheet.macroenabled.12 |