Conserved positions in expansin homologueshttps://doi.org/10.18419/darus-735Lohoff, CarolineDaRUS2020-04-092021-05-03T07:35:09ZConserved positions in the N- and C-terminal expansin domains of different groups from the Expansin Engineering Database (occurring in at least 70% of the annotated sequence entries). The expansin domains were annotated using hmmscan (from the HMMER software suite) against all sequence entries in the Expansin Engineering Database.Medicine, Health and Life Sciencesconservation analysisEnglishLohoff C., Buchholz P. C. F., Le Roes-Hill M. & Pleiss J. (2020). The Expansin Engineering Database: a navigation and classification tool for expansins and homologues. Proteins: Structure, Function, and Bioinformatics 89:2., doi, 10.1002/prot.26001, https://doi.org/10.1002/prot.260012020-04-09Buchholz, Patrick C. F.2020-03-10Lohoff, Caroline, 2020, "Profile hidden Markov models of the ExED", <a href="https://doi.org/10.18419/darus-623">doi:10.18419/darus-623</a>, DaRUSExpansin Engineering Database (<a href="https://exed.biocatnet.de/">https://exed.biocatnet.de/</a>)<br> PDB (<a href="https://doi.org/10.2210/pdb4FER/pdb">doi: 10.2210/pdb4FER/pdb</a>)<br> Georgelis N, Tabuchi A, Nikolaidis N, Cosgrove DJ. Structure-function analysis of the bacterial expansin EXLX1. J Biol Chem. 2011;286:16814-16823. <a href="https://doi.org/10.1074/jbc.M111.225037">doi:10.1074/jbc.M111.225037</a><br> Yennawar NH, Li AC, Dudzinski DM, Tabuchi A, Cosgrove DJ. Crystal structure and activities of EXPB1 (Zea m 1), a β-expansin and group-1 pollen allergen from maize. Proc Natl Acad Sci U S A. 2006;103:14664-14671. <a href="https://doi.org/10.1073/pnas.0605979103">doi:10.1073/pnas.0605979103</a>CC BY 4.0