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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: Distributing Higher-Dimensional Simulations Across Compute Systems: A Widely Distributed Combination Technique |
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Identification Number: |
doi:10.18419/darus-2123 |
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Distributor: |
DaRUS |
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Date of Distribution: |
2021-10-18 |
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Version: |
1 |
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Bibliographic Citation: |
Pollinger, Theresa, 2021, "Replication Data for: Distributing Higher-Dimensional Simulations Across Compute Systems: A Widely Distributed Combination Technique", https://doi.org/10.18419/darus-2123, DaRUS, V1, UNF:6:azg9VIhJn6FUwnNgme2Kjg== [fileUNF] |
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Citation |
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Title: |
Replication Data for: Distributing Higher-Dimensional Simulations Across Compute Systems: A Widely Distributed Combination Technique |
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Identification Number: |
doi:10.18419/darus-2123 |
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Authoring Entity: |
Pollinger, Theresa (Universität Stuttgart) |
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Producer: |
Chair for Scientific Computing |
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Software used in Production: |
DisCoTec |
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Software used in Production: |
discotec-scaling-scripts |
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Grant Number: |
12985 |
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Grant Number: |
230862074 |
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Distributor: |
DaRUS |
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Access Authority: |
Pollinger, Theresa |
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Depositor: |
Pollinger, Theresa |
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Date of Deposit: |
2021-08-30 |
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Holdings Information: |
https://doi.org/10.18419/darus-2123 |
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Study Scope |
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Keywords: |
Computer and Information Science |
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Abstract: |
<p>Scripts to run the weak, strong and remote strong scaling tests described in <b>"Distributing Higher-Dimensional Simulations Across Compute Systems: A Widely Distributed Combination Technique"</b>, as well as measurements obtained on the Machines HAWK and our Institute's epyc machine.</p> |
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<p>To reproduce, follow the <a href="https://github.com/freifrauvonbleifrei/discotec-scaling-scripts">build procedure detailed in the scripts repository</a>, making sure that the flags passed in `DisCoTec/distributedcombigrid/examples/distributed_third_level/Makefile.template` match the ones passed during library compilation.</p> <p>Observe the folder structure for the different tests performed: To run a specific test case, the executable `combi_example` was linked into a folder, and the parameter file `ctparam` was provided. The files called `run.sh` are batch system submission scripts. `generate_test_folders_and_submit.sh` automates the process for a series of weak scaling runs, which can be adjusted by modifying the script. Time measurement outputs are given as `timers.json` files, where each process wrote a portion of the file at the end (can get very large for many processes and many time steps). The `plot_*` files in discotec-scaling-scripts help extract the relevant information from the `timers.json` files.</p> |
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Date of Collection: |
2021-08-25-2021-10-01 |
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Kind of Data: |
HPC measurement data |
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Notes: |
Presented at HiPar 2021 (cf. <a href="https://www.hipar.net">hipar.net</a> or <a href="https://web.archive.org/web/20220130012858/https://www.hipar.net/">https://web.archive.org/web/20220130012858/https://www.hipar.net/</a>) |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Other Study Description Materials |
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Related Publications |
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Citation |
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Title: |
Distributing Higher-Dimensional Simulations Across Compute Systems: A Widely Distributed Combination Technique; Theresa Pollinger, Marcel Hurler, Michael Obersteiner, and Dirk Pflüger, 2021. In: 2021 IEEE/ACM International Workshop on Hierarchical Parallelism for Exascale Computing (HiPar), pp. 1-9. |
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Identification Number: |
10.1109/HiPar54615.2021.00006 |
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Bibliographic Citation: |
Distributing Higher-Dimensional Simulations Across Compute Systems: A Widely Distributed Combination Technique; Theresa Pollinger, Marcel Hurler, Michael Obersteiner, and Dirk Pflüger, 2021. In: 2021 IEEE/ACM International Workshop on Hierarchical Parallelism for Exascale Computing (HiPar), pp. 1-9. |
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File Description--f67830 |
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File: advection_strong_local_hawk.tab |
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Notes: |
UNF:6:s2olIZ1ncoYU4ryOGh/ksw== |
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File Description--f68285 |
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File: advection_strong_local_hawk_n7_tab.tab |
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Notes: |
UNF:6:M3/ZIEjj3or1wIy6AGEKfQ== |
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File Description--f67977 |
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File: advection_strong_wide_hawk-epyc.tab |
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Notes: |
UNF:6:lQ7KP9AkRZwtL1Q4OfTYag== |
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File Description--f68287 |
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File: advection_strong_wide_hawk-epyc_n7_tab.tab |
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Notes: |
UNF:6:NalBb3r3jfmapNo6M5ESSw== |
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File Description--f68150 |
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File: advection_weak_hawk.tab |
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Notes: |
UNF:6:uKbOSaiSYQOzGSV0WWx+7A== |
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File Description--f68284 |
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File: advection_weak_hawk_n7_tab.tab |
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Notes: |
UNF:6:Y6SQohi8SgFGcZNr6ZOltQ== |
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File Description--f68282 |
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File: monte_carlo_local_n7_tab.tab |
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Notes: |
UNF:6:tFcPWv2bKpQcBKQYwV43+w== |
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File Description--f68288 |
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File: monte_carlo_local_tab.tab |
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Notes: |
UNF:6:Vo213idAylYVUJMWRndMpA== |
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File Description--f68281 |
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File: monte_carlo_wide_tab.tab |
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Notes: |
UNF:6:/XG/FB8QbG1dTGoJeaH1qw== |
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List of Variables: |
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Variables |
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f67830 Location: |
Summary Statistics: Min. 1.0; Mean 56.77777777777778; StDev 85.41630081222462; Max. 256.0; Valid 9.0 Variable Format: numeric Notes: UNF:6:fzqerCHPZGWO7g28lyC+uA== |
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f67830 Location: |
Summary Statistics: Min. 121022.45809659091; Max. 2.6135788545454547E7; StDev 8908715.132979171; Valid 9.0; Mean 6312278.467250632 Variable Format: numeric Notes: UNF:6:uPQdFT4SDHhXCS+MOYlrtw== |
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f67830 Location: |
Summary Statistics: Max. 55881.745374044884; Min. 6597.086575398874; StDev 14846.942163287848; Valid 9.0; Mean 18440.517645954023 Variable Format: numeric Notes: UNF:6:VMkMfXe/kvy4SEHwff2xOw== |
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f67830 Location: |
Summary Statistics: Max. 1.39645502E7; Mean 4250674.159201389; Min. 595764.02578125; Valid 9.0; StDev 4962892.414281625; Variable Format: numeric Notes: UNF:6:4nohwr7twEayLwlpEFRDQg== |
|
f67830 Location: |
Summary Statistics: Max. 48961.367604061066; StDev 12329.008765557213; Valid 9.0; Mean 17972.747718159793; Min. 11240.66111892828; Variable Format: numeric Notes: UNF:6:h6hGQ9Jaw/N9Kuy3yZJo1A== |
|
f67830 Location: |
Summary Statistics: Min. 150421.9090909091; StDev 8909208.191879297; Max. 2.614094090909091E7; Valid 9.0; Mean 6338826.626262627; Variable Format: numeric Notes: UNF:6:FR9VVoGMrAImh+hOiRy4aA== |
|
f67830 Location: |
Summary Statistics: StDev 3979.9079668210343; Mean 4721.858345824187; Max. 12566.640293430175; Valid 9.0; Min. 1541.277349398412; Variable Format: numeric Notes: UNF:6:RH7dZxptop9qCMJpg/ED8g== |
|
f67830 Location: |
Summary Statistics: StDev 4962491.4119919; Valid 9.0; Mean 4270885.822222223; Max. 1.39645773E7; Min. 614462.0; Variable Format: numeric Notes: UNF:6:YbPcFthstmPi/9/gKR1D8g== |
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f67830 Location: |
Summary Statistics: Max. 25852.76951527631; Min. 5458.91500300197; Mean 11565.21749330074; StDev 7497.589855362313; Valid 9.0 Variable Format: numeric Notes: UNF:6:OHEwWtlfXHoFAp51vTgevA== |
|
f68285 Location: |
Summary Statistics: Mean 185.81818181818184; Min. 1.0; Valid 11.0; Max. 1023.0; StDev 318.54475923543873 Variable Format: numeric Notes: UNF:6:W5VdDvFOQ4SF17M8WsJ5SA== |
|
f68285 Location: |
Summary Statistics: Valid 11.0; Max. 3.873806618181818E7; Min. 53925.63636363636; StDev 1.20665512199297E7; Mean 6991532.016528925; Variable Format: numeric Notes: UNF:6:COTH8vMz1nDUGgiaCMfcVQ== |
|
f68285 Location: |
Summary Statistics: StDev 113645.88078396795; Min. 193.95594626334375; Valid 11.0; Max. 340246.1678792465; Mean 59896.070556339146 Variable Format: numeric Notes: UNF:6:c3T63GUw4CLoUCdl93EAcQ== |
|
f68285 Location: |
Summary Statistics: Min. 823966.9; Valid 11.0; StDev 1.0083133534314819E7; Max. 3.28888863E7; Mean 6470531.090909091 Variable Format: numeric Notes: UNF:6:SF6fCysV1JH130GRB2i9Sg== |
|
f68285 Location: |
Summary Statistics: Mean 47288.54958806497; Min. 4414.902613874965; Max. 316297.3398213143; StDev 92301.67082436176; Valid 11.0; Variable Format: numeric Notes: UNF:6:IOpceowOlaJYFT0t9ieSqA== |
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f68285 Location: |
Summary Statistics: Valid 11.0; Min. 30657.333333333332; Mean 2858584.3863636362; Max. 1.5584173583333334E7; StDev 4874397.843375945; Variable Format: numeric Notes: UNF:6:Ggqdhkrfeb33optaNUjJ4g== |
|
f68285 Location: |
Summary Statistics: Valid 11.0; Min. 121.31387206562798; StDev 121346.84251311826; Mean 80874.24991009284; Max. 396011.8705125569 Variable Format: numeric Notes: UNF:6:Qj5FHp+1RENFN5zAPpabFw== |
|
f68285 Location: |
Summary Statistics: Valid 11.0; Max. 1.66390625E7; Min. 22395.916666666668; StDev 5197324.0014900565; Mean 3036700.446969697; Variable Format: numeric Notes: UNF:6:CSBfF1sol8VnH/+HOTAUgg== |
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f68285 Location: |
Summary Statistics: StDev 84721.52794230587; Max. 284568.7132100084; Min. 94.157189788613; Mean 37969.80234315337; Valid 11.0; Variable Format: numeric Notes: UNF:6:7rkDtH1xs+Sx2hegAI+XSw== |
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f67977 Location: |
Summary Statistics: Mean 56.77777777777777; Max. 256.0; Valid 18.0; Min. 1.0; StDev 82.86598362313734; Variable Format: numeric Notes: UNF:6:vtyq2ow21Y/iT9y+Vb85Nw== |
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f67977 Location: |
Variable Format: character Notes: UNF:6:kWM7lblvjW/KwrtVD082XQ== |
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f67977 Location: |
Summary Statistics: Max. 2.614094090909091E7; Valid 18.0; Min. 166669.0; Mean 1.0312196475757577E7; StDev 8231780.123075247 Variable Format: numeric Notes: UNF:6:u3m9J40R3gx4sZv6zkZVDQ== |
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f67977 Location: |
Summary Statistics: StDev 242132.42485376104; Min. 251.14935795259362; Mean 186566.17890312144; Max. 665644.738406727; Valid 18.0; Variable Format: numeric Notes: UNF:6:V4p5iHk59YPH/XmaiET7GA== |
|
f68287 Location: |
Summary Statistics: Valid 11.0; StDev 318.54475923543873; Min. 1.0; Max. 1023.0; Mean 185.81818181818184; Variable Format: numeric Notes: UNF:6:W5VdDvFOQ4SF17M8WsJ5SA== |
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f68287 Location: |
Variable Format: character Notes: UNF:6:A2nQc44esCCkRELdAmnQMA== |
|
f68287 Location: |
Variable Format: character Notes: UNF:6:7Kv5E0ugKvjwh/o1D3iIjQ== |
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f68287 Location: |
Variable Format: character Notes: UNF:6:L5r93AV/ZOmXWj8/hTs4tw== |
|
f68287 Location: |
Variable Format: character Notes: UNF:6:fRtglRViVWtxQHkRcyq+Sw== |
|
f68287 Location: |
Variable Format: character Notes: UNF:6:pO21/qWh7VPZ5cO/wIcmRA== |
|
f68287 Location: |
Variable Format: character Notes: UNF:6:I7MBU0ckZKhLP1AXuZDtFw== |
|
f68150 Location: |
Summary Statistics: Max. 512.0; Valid 10.0; Min. 1.0; StDev 164.94851048466947; Mean 102.30000000000001 Variable Format: numeric Notes: UNF:6:YomsUeVli7LdrVkE5377Aw== |
|
f68150 Location: |
Summary Statistics: Mean 2.8693756527272727E7; StDev 3322713.2974669873; Max. 3.3152568818181816E7; Valid 10.0; Min. 2.610839909090909E7 Variable Format: numeric Notes: UNF:6:Puzar9mXfsNV2GvgpLhiCQ== |
|
f68150 Location: |
Summary Statistics: StDev 150221.78567408214; Valid 10.0; Mean 57980.18197998797; Min. 3417.1635886705126; Max. 485128.6990747578 Variable Format: numeric Notes: UNF:6:2FCNAhBl9VwK5+sX8rTrqw== |
|
f68150 Location: |
Summary Statistics: Valid 10.0; Max. 2.97468597E7; Mean 1.987503883E7; StDev 6453917.667579089; Min. 1.32642735E7; Variable Format: numeric Notes: UNF:6:K4I4iFETHFGZyT2/BKoRnA== |
|
f68150 Location: |
Summary Statistics: StDev 53605.27953271391; Mean 47292.43797499388; Valid 10.0; Max. 187286.1322224366; Min. 10920.748593846485; Variable Format: numeric Notes: UNF:6:Ajv9AcpXN3Za8B3ZBY8Bnw== |
|
f68284 Location: |
Summary Statistics: Max. 2048.0; Mean 341.25; StDev 617.5454528726095; Valid 12.0; Min. 1.0; Variable Format: numeric Notes: UNF:6:BOIehQ02AjYdourH9xM5fg== |
|
f68284 Location: |
Summary Statistics: Min. 3.1361920272727273E7; Valid 12.0; Max. 4.027266227272727E7; StDev 4252912.476671779; Mean 3.563429727272727E7 Variable Format: numeric Notes: UNF:6:FoCXZfti6LZkaECDb/xBeQ== |
|
f68284 Location: |
Summary Statistics: StDev 129701.62090936197; Mean 105230.56663400572; Max. 342079.91061707365; Min. 5451.359471053494; Valid 12.0 Variable Format: numeric Notes: UNF:6:+JB7ZjjwX9XokR4BeKcXow== |
|
f68284 Location: |
Summary Statistics: Valid 12.0; Max. 5.45073526E7; Mean 3.1041521225E7; Min. 1.7432103E7; StDev 1.173256644795077E7 Variable Format: numeric Notes: UNF:6:xnawiPUSD1Pzn5XKkHjrGQ== |
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f68284 Location: |
Summary Statistics: Mean 85644.60929618118; Valid 12.0; StDev 100510.86200428278; Min. 8920.254777191065; Max. 364624.6959529209 Variable Format: numeric Notes: UNF:6:HyEBqA72vEGekmX9ZlczqA== |
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f68284 Location: |
Summary Statistics: Min. 8463149.166666666; Mean 1.5278053291666666E7; Valid 12.0; Max. 3.297899025E7; StDev 6969795.805469212 Variable Format: numeric Notes: UNF:6:H5795jahQaAaIrUg7qvHVw== |
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f68284 Location: |
Summary Statistics: Max. 4.5313721085062176E7; Mean 4828321.268743702; Valid 12.0; StDev 1.3211193361818582E7; Min. 7967.332640835465; Variable Format: numeric Notes: UNF:6:H53HOY1Gcq9Kli53E/E91w== |
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f68284 Location: |
Summary Statistics: StDev 7700414.041712114; Max. 3.4347971416666664E7; Mean 1.6643143618055556E7; Valid 12.0; Min. 8829239.0 Variable Format: numeric Notes: UNF:6:yO0MHl2MU9XvIsxQ09hBug== |
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f68284 Location: |
Summary Statistics: StDev 92871.05607162903; Mean 63050.64335594022; Min. 1566.5618116506678; Max. 335934.4727454299; Valid 12.0; Variable Format: numeric Notes: UNF:6:of8qJDqC+vPhiG2elcz9zA== |
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f68282 Location: |
Summary Statistics: Valid 200.0; Mean 0.5025; Min. 0.005; StDev 0.2893959225697557; Max. 1.0 Variable Format: numeric Notes: UNF:6:Tkr/Vb0Zobqesc8kmc3yJg== |
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f68282 Location: |
Summary Statistics: Min. 0.00199758; Max. 0.136075; Valid 200.0; Mean 0.06958002790000001; StDev 0.037914668399177245 Variable Format: numeric Notes: UNF:6:I2P0AMneULptgrXIXELKGA== |
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f68282 Location: |
Summary Statistics: StDev 0.017277436294593464; Valid 200.0; Mean 0.031054269065000004; Max. 0.0601927; Min. 3.5939E-4 Variable Format: numeric Notes: UNF:6:/fRyjKYm33DrDDRRwYpvyA== |
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f68282 Location: |
Summary Statistics: Valid 200.0; Max. 0.0778255; Mean 0.04073793272500001; StDev 0.022150067447532614; Min. 6.36525E-4 Variable Format: numeric Notes: UNF:6:NWUYz3H/d2yUjffBNwGvpg== |
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f68288 Location: |
Summary Statistics: StDev 0.2901149197588202; Max. 1.0; Mean 0.505; Min. 0.01; Valid 100.0; Variable Format: numeric Notes: UNF:6:Cfi/sAXGPWqaCPa9HliZEQ== |
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f68288 Location: |
Summary Statistics: StDev 0.07348551032056068; Max. 0.255054; Mean 0.1409080033; Min. 0.00506103; Valid 100.0 Variable Format: numeric Notes: UNF:6:2pI+Hs++aVGUCaNDdIagDQ== |
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f68288 Location: |
Summary Statistics: Valid 100.0; StDev 0.0405477917764328; Min. 0.00184871; Max. 0.14015; Mean 0.07455954929999999 Variable Format: numeric Notes: UNF:6:CRyOadei6E15rNQfL7Lz7A== |
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f68288 Location: |
Summary Statistics: Valid 100.0; Min. 0.00271231; Mean 0.0900999798; StDev 0.04756119176358467; Max. 0.166032 Variable Format: numeric Notes: UNF:6:jjwy3VOnNkTTKx/TMU4YvQ== |
|
f68281 Location: |
Summary Statistics: Min. 0.01; Valid 10.0; Max. 0.1; Mean 0.055; StDev 0.030276503540974917 Variable Format: numeric Notes: UNF:6:d+tSel7ZTtUMThj3BmMb4w== |
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f68281 Location: |
Summary Statistics: Min. 0.00506103; Max. 0.0323156; StDev 0.009016999370219254; Mean 0.018515053; Valid 10.0; Variable Format: numeric Notes: UNF:6:SfcsNOu7hzhjv2/SD4UIzQ== |
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f68281 Location: |
Summary Statistics: Max. 0.0162838; Min. 0.00184871; Valid 10.0; Mean 0.009127393000000001; StDev 0.004869135681215918 Variable Format: numeric Notes: UNF:6:PThssLWYYvDYkbLkWxaVcA== |
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f68281 Location: |
Summary Statistics: Max. 0.0210474; Valid 10.0; StDev 0.0061748051295455655; Mean 0.012010248000000001; Min. 0.00271231 Variable Format: numeric Notes: UNF:6:xFZHISbhrWfUR9QefbCjHA== |
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Label: |
collect.e1337021 |
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Notes: |
application/octet-stream |
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Label: |
collect.o1337021 |
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Notes: |
application/octet-stream |
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Label: |
compile_hawk.sh |
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Notes: |
application/x-shellscript |
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Label: |
ctparam |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
generate_test_folders_and_submit.sh |
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Notes: |
application/x-sh |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
run_collect.sh |
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Notes: |
application/x-sh |
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Label: |
ctparam |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
fg.e1388062 |
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Notes: |
application/octet-stream |
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Label: |
fg.o1388062 |
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Notes: |
application/octet-stream |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
timers.json |
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Notes: |
application/json |
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Label: |
compile.sh |
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Notes: |
application/x-sh |
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Label: |
gene.e1386763 |
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Notes: |
application/octet-stream |
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Label: |
GENE.finished |
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Notes: |
application/octet-stream |
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Label: |
gene.o1386763 |
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Notes: |
application/octet-stream |
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Label: |
gene_hawk |
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Notes: |
application/octet-stream |
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Label: |
parameters |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
setenv.sh |
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Notes: |
application/x-sh |
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Label: |
autopar.dat |
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Notes: |
text/x-fixed-field |
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Label: |
energy.dat |
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Notes: |
text/x-fixed-field |
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Label: |
nrg.dat |
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Notes: |
text/x-fixed-field |
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Label: |
parameters.dat |
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Notes: |
text/x-fixed-field |
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Label: |
s_alpha.dat |
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Notes: |
text/x-fixed-field |
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Label: |
ctparam |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
n7_weak_1.e1345969 |
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Notes: |
application/octet-stream |
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Label: |
n7_weak_1.o1345969 |
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Notes: |
application/octet-stream |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
timers.json |
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Notes: |
application/json |
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Label: |
ctparam |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
n7_weak_1024.e1346068 |
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Notes: |
application/octet-stream |
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Label: |
n7_weak_1024.o1346068 |
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Notes: |
application/octet-stream |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
timers.json |
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Notes: |
application/json |
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Label: |
ctparam |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
n7_weak_128.e1345976 |
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Notes: |
application/octet-stream |
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Label: |
n7_weak_128.o1345976 |
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Notes: |
application/octet-stream |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
timers.json |
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Notes: |
application/json |
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Label: |
ctparam |
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Notes: |
text/plain; charset=US-ASCII |
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Label: |
n7_weak_16.e1345973 |
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Notes: |
application/octet-stream |
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Label: |
n7_weak_16.o1345973 |
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Notes: |
application/octet-stream |
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Label: |
run.sh |
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Notes: |
application/x-sh |
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Label: |
timers.json |
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Notes: |
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ctparam_tl_system1 |
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ctscheme_tl_system_1.json |
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run.sh |
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ctparam_tl_system1 |
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ctscheme_tl_system_1.json |
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run.sh |
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advection_strong_difference.csv |
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advection_strong_local_hawk_n7.csv |
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advection_strong_wide_hawk-epyc_n7.csv |
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advection_weak_hawk_n7.csv |
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monte_carlo_local.csv |
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monte_carlo_wide.csv |
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